Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00346Q8IVM7 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 DMBT1P1-203ENST00000636837 4628 ntBASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 BEND3P1-201ENST00000421591 1944 ntBASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 AC092933.1-201ENST00000393644 945 ntBASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 FAM8A4P-201ENST00000435433 1213 ntBASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 RNA5SP486-201ENST00000515961 83 ntBASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 AP003171.2-201ENST00000528208 925 ntBASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 MIR4683-201ENST00000579659 81 ntBASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 AC015936.2-201ENST00000593177 259 ntBASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 BX088702.1-201ENST00000610784 235 ntBASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 AC132938.4-201ENST00000623835 848 ntBASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
LINC00346Q8IVM7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00346Q8IVM7 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
LINC00346Q8IVM7 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00346Q8IVM7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00346Q8IVM7 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.96□□□□□ -0.34
LINC00346Q8IVM7 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00346Q8IVM7 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00346Q8IVM7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.96□□□□□ -0.34
LINC00346Q8IVM7 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00346Q8IVM7 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.96□□□□□ -0.34
LINC00346Q8IVM7 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
LINC00346Q8IVM7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
LINC00346Q8IVM7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 AC138969.2-201ENST00000532739 9932 ntBASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC00346Q8IVM7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms