Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LYSMD2Q8IV50 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 AL353705.2-201ENST00000428243 662 ntBASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 FAM58CP-201ENST00000435741 640 ntBASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 AC069335.1-201ENST00000489972 472 ntBASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 AL662844.1-201ENST00000546340 181 ntBASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 KRT18P8-201ENST00000581937 1246 ntBASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.83□□□□□ -0.36
LYSMD2Q8IV50 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 AOC4P-203ENST00000566825 2289 ntBASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 LINC00638-201ENST00000555578 2518 ntBASIC12.82□□□□□ -0.36
LYSMD2Q8IV50 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms