Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 AL009183.1-201ENST00000603760 355 ntBASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 Z83851.2-201ENST00000609564 659 ntBASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 AC148477.8-201ENST00000624298 468 ntBASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 AC092123.2-201ENST00000611189 5421 ntBASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 AC022400.8-201ENST00000623453 3599 ntBASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
KCNIP4Q6PIL6 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 AC009474.1-201ENST00000455096 1565 ntBASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 RNA5SP416-201ENST00000516838 111 ntBASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 RNA5SP415-201ENST00000517246 115 ntBASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 AC215219.1-201ENST00000400706 1817 ntBASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
KCNIP4Q6PIL6 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.36□□□□□ -0.59
KCNIP4Q6PIL6 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms