Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 TSPY16P-201ENST00000449843 468 ntBASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 AC092183.1-201ENST00000469884 875 ntBASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 AC145423.3-201ENST00000615987 467 ntBASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 FKBP4P6-201ENST00000457486 1332 ntBASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 AC118758.2-201ENST00000614242 2813 ntBASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 AP000593.2-201ENST00000542775 1433 ntBASIC12.28□□□□□ -0.44
ZNF880Q6PDB4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 AC020910.5-201ENST00000623668 1865 ntBASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 AC015818.8-201ENST00000587907 1519 ntBASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.27□□□□□ -0.44
ZNF880Q6PDB4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF880Q6PDB4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
ZNF880Q6PDB4 AL138709.1-201ENST00000614840 1693 ntBASIC12.27□□□□□ -0.45
ZNF880Q6PDB4 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.27□□□□□ -0.45
ZNF880Q6PDB4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF880Q6PDB4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
ZNF880Q6PDB4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF880Q6PDB4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF880Q6PDB4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ZNF880Q6PDB4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.27□□□□□ -0.45
ZNF880Q6PDB4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.27□□□□□ -0.45
ZNF880Q6PDB4 PUDPP3-201ENST00000445368 636 ntBASIC12.27□□□□□ -0.45
ZNF880Q6PDB4 AC012441.1-201ENST00000446669 685 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms