Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 OR7E12P-201ENST00000344740 973 ntBASIC13.88□□□□□ -0.19
RIF1Q5UIP0 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 MIR193A-201ENST00000384882 88 ntBASIC13.88□□□□□ -0.19
RIF1Q5UIP0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 RN7SKP212-201ENST00000410851 328 ntBASIC13.88□□□□□ -0.19
RIF1Q5UIP0 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 RN7SL478P-201ENST00000584358 298 ntBASIC13.88□□□□□ -0.19
RIF1Q5UIP0 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
RIF1Q5UIP0 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 PKD1P1-201ENST00000458669 6805 ntBASIC13.87□□□□□ -0.19
RIF1Q5UIP0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 AL136084.1-201ENST00000449172 318 ntBASIC13.87□□□□□ -0.19
RIF1Q5UIP0 OR2A1-AS1-203ENST00000468575 568 ntBASIC13.87□□□□□ -0.19
RIF1Q5UIP0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 SSR4P1-203ENST00000599569 2260 ntBASIC13.87□□□□□ -0.19
RIF1Q5UIP0 KRT8P28-201ENST00000433288 1390 ntBASIC13.87□□□□□ -0.19
RIF1Q5UIP0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 AL590440.2-201ENST00000641973 1595 ntBASIC13.87□□□□□ -0.19
RIF1Q5UIP0 CROCCP1-201ENST00000426910 5675 ntBASIC13.87□□□□□ -0.19
RIF1Q5UIP0 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 AP002414.2-201ENST00000591780 3365 ntBASIC13.87□□□□□ -0.19
RIF1Q5UIP0 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 POP5-201ENST00000341039 913 ntTSL 2 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 AC048382.6-201ENST00000621980 1223 ntBASIC13.87□□□□□ -0.19
RIF1Q5UIP0 AC002511.3-201ENST00000638098 420 ntBASIC13.87□□□□□ -0.19
RIF1Q5UIP0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RIF1Q5UIP0 KHSRPP1-201ENST00000427983 1768 ntBASIC13.87□□□□□ -0.19
RIF1Q5UIP0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 AC022080.1-201ENST00000366255 781 ntBASIC13.86□□□□□ -0.19
RIF1Q5UIP0 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 AC092903.1-201ENST00000466506 262 ntBASIC13.86□□□□□ -0.19
RIF1Q5UIP0 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 MIR5193-201ENST00000584510 109 ntBASIC13.86□□□□□ -0.19
RIF1Q5UIP0 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 BX322562.1-201ENST00000617004 561 ntBASIC13.86□□□□□ -0.19
RIF1Q5UIP0 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RIF1Q5UIP0 LINC01101-201ENST00000622953 1884 ntBASIC13.86□□□□□ -0.19
RIF1Q5UIP0 AC092850.2-201ENST00000623821 2697 ntBASIC13.86□□□□□ -0.19
RIF1Q5UIP0 PDXDC2P-206ENST00000534700 1315 ntBASIC13.86□□□□□ -0.19
RIF1Q5UIP0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms