Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.74□□□□□ -0.21
TRA2BP62995 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.74□□□□□ -0.21
TRA2BP62995 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.74□□□□□ -0.21
TRA2BP62995 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.74□□□□□ -0.21
TRA2BP62995 RNA5SP412-201ENST00000516234 123 ntBASIC13.74□□□□□ -0.21
TRA2BP62995 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.74□□□□□ -0.21
TRA2BP62995 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.74□□□□□ -0.21
TRA2BP62995 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRA2BP62995 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.74□□□□□ -0.21
TRA2BP62995 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TRA2BP62995 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.74□□□□□ -0.21
TRA2BP62995 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 LAP3P2-201ENST00000454686 1454 ntBASIC13.74□□□□□ -0.21
TRA2BP62995 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.74□□□□□ -0.21
TRA2BP62995 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRA2BP62995 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.74□□□□□ -0.21
TRA2BP62995 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRA2BP62995 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 CICP16-201ENST00000502609 2813 ntBASIC13.73□□□□□ -0.21
TRA2BP62995 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.73□□□□□ -0.21
TRA2BP62995 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRA2BP62995 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 FAM21FP-201ENST00000426241 1131 ntBASIC13.73□□□□□ -0.21
TRA2BP62995 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 KRT223P-202ENST00000449164 1292 ntBASIC13.73□□□□□ -0.21
TRA2BP62995 TUBB8P8-201ENST00000458717 1058 ntBASIC13.73□□□□□ -0.21
TRA2BP62995 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.73□□□□□ -0.21
TRA2BP62995 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.73□□□□□ -0.21
TRA2BP62995 AC017083.2-201ENST00000608069 979 ntBASIC13.73□□□□□ -0.21
TRA2BP62995 AP000346.4-201ENST00000614827 381 ntBASIC13.73□□□□□ -0.21
TRA2BP62995 MIR6805-201ENST00000615055 62 ntBASIC13.73□□□□□ -0.21
TRA2BP62995 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.73□□□□□ -0.21
TRA2BP62995 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRA2BP62995 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.73□□□□□ -0.21
TRA2BP62995 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
TRA2BP62995 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRA2BP62995 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 AC117489.1-201ENST00000625169 3217 ntBASIC13.73□□□□□ -0.21
TRA2BP62995 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.73□□□□□ -0.21
TRA2BP62995 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRA2BP62995 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRA2BP62995 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.73□□□□□ -0.21
TRA2BP62995 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.72□□□□□ -0.21
TRA2BP62995 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRA2BP62995 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
TRA2BP62995 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRA2BP62995 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRA2BP62995 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms