Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
VBP1P61758 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
VBP1P61758 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VBP1P61758 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.12□□□□□ -0.31
VBP1P61758 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VBP1P61758 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VBP1P61758 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.12□□□□□ -0.31
VBP1P61758 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VBP1P61758 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
VBP1P61758 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VBP1P61758 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VBP1P61758 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VBP1P61758 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.12□□□□□ -0.31
VBP1P61758 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VBP1P61758 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 AC115284.2-201ENST00000624646 2054 ntBASIC13.11□□□□□ -0.31
VBP1P61758 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 AL391647.1-201ENST00000395664 511 ntBASIC13.11□□□□□ -0.31
VBP1P61758 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.11□□□□□ -0.31
VBP1P61758 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 LINC01225-203ENST00000563550 1244 ntBASIC13.11□□□□□ -0.31
VBP1P61758 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 AC004623.1-201ENST00000624592 2127 ntBASIC13.11□□□□□ -0.31
VBP1P61758 AC066615.1-201ENST00000640911 628 ntBASIC13.11□□□□□ -0.31
VBP1P61758 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 Z98257.2-202ENST00000641138 1548 ntBASIC13.11□□□□□ -0.31
VBP1P61758 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
VBP1P61758 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 AC009474.1-201ENST00000455096 1565 ntBASIC13.11□□□□□ -0.31
VBP1P61758 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.11□□□□□ -0.31
VBP1P61758 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
VBP1P61758 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VBP1P61758 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 KRT8P12-202ENST00000472924 1397 ntBASIC13.1□□□□□ -0.31
VBP1P61758 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
VBP1P61758 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
VBP1P61758 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.1□□□□□ -0.31
VBP1P61758 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.1□□□□□ -0.31
VBP1P61758 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.1□□□□□ -0.31
VBP1P61758 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.1□□□□□ -0.31
VBP1P61758 RN7SL589P-201ENST00000481268 310 ntBASIC13.1□□□□□ -0.31
VBP1P61758 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 IGHV3-62-201ENST00000520057 340 ntBASIC13.1□□□□□ -0.31
VBP1P61758 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.1□□□□□ -0.31
VBP1P61758 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VBP1P61758 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 MIR7706-201ENST00000613747 67 ntBASIC13.1□□□□□ -0.31
VBP1P61758 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
VBP1P61758 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms