Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
NR1H2P55055 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
NR1H2P55055 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H2P55055 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H2P55055 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.94□□□□□ -0.18
NR1H2P55055 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H2P55055 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H2P55055 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H2P55055 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.94□□□□□ -0.18
NR1H2P55055 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.94□□□□□ -0.18
NR1H2P55055 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H2P55055 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.94□□□□□ -0.18
NR1H2P55055 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H2P55055 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H2P55055 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.94□□□□□ -0.18
NR1H2P55055 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H2P55055 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
NR1H2P55055 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.94□□□□□ -0.18
NR1H2P55055 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NR1H2P55055 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H2P55055 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H2P55055 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.93□□□□□ -0.18
NR1H2P55055 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.93□□□□□ -0.18
NR1H2P55055 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.93□□□□□ -0.18
NR1H2P55055 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
NR1H2P55055 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NR1H2P55055 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NR1H2P55055 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.93□□□□□ -0.18
NR1H2P55055 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 TPRX2P-201ENST00000535362 881 ntBASIC13.93□□□□□ -0.18
NR1H2P55055 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H2P55055 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
NR1H2P55055 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NR1H2P55055 HNRNPUP1-201ENST00000554987 333 ntBASIC13.93□□□□□ -0.18
NR1H2P55055 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
NR1H2P55055 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
NR1H2P55055 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.93□□□□□ -0.18
NR1H2P55055 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.93□□□□□ -0.18
NR1H2P55055 AL359881.2-201ENST00000602973 570 ntBASIC13.93□□□□□ -0.18
NR1H2P55055 AC074044.1-201ENST00000609673 707 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms