Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CACNB3P54284 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.11■□□□□ 0.33
CACNB3P54284 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CACNB3P54284 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CACNB3P54284 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CACNB3P54284 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CACNB3P54284 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNB3P54284 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CACNB3P54284 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CACNB3P54284 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.1■□□□□ 0.33
CACNB3P54284 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.1■□□□□ 0.33
CACNB3P54284 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.1■□□□□ 0.33
CACNB3P54284 LINC00634-202ENST00000505157 222 ntBASIC17.1■□□□□ 0.33
CACNB3P54284 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.1■□□□□ 0.33
CACNB3P54284 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CACNB3P54284 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.1■□□□□ 0.33
CACNB3P54284 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.1■□□□□ 0.33
CACNB3P54284 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.1■□□□□ 0.33
CACNB3P54284 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.1■□□□□ 0.33
CACNB3P54284 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.1■□□□□ 0.33
CACNB3P54284 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CACNB3P54284 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CACNB3P54284 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CACNB3P54284 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 MYADML-201ENST00000474610 2147 ntBASIC17.09■□□□□ 0.33
CACNB3P54284 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CACNB3P54284 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
CACNB3P54284 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNB3P54284 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CACNB3P54284 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CACNB3P54284 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNB3P54284 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.09■□□□□ 0.33
CACNB3P54284 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.09■□□□□ 0.33
CACNB3P54284 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.09■□□□□ 0.33
CACNB3P54284 AC140658.4-201ENST00000561990 352 ntBASIC17.09■□□□□ 0.33
CACNB3P54284 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 AC005586.2-201ENST00000563946 837 ntBASIC17.09■□□□□ 0.33
CACNB3P54284 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.09■□□□□ 0.33
CACNB3P54284 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.09■□□□□ 0.33
CACNB3P54284 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.09■□□□□ 0.33
CACNB3P54284 AP000322.3-201ENST00000608665 388 ntBASIC17.09■□□□□ 0.33
CACNB3P54284 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CACNB3P54284 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNB3P54284 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNB3P54284 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNB3P54284 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CACNB3P54284 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNB3P54284 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNB3P54284 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CACNB3P54284 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CACNB3P54284 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.09■□□□□ 0.33
CACNB3P54284 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CACNB3P54284 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CACNB3P54284 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CACNB3P54284 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CACNB3P54284 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CACNB3P54284 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.08■□□□□ 0.33
CACNB3P54284 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.08■□□□□ 0.33
CACNB3P54284 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.08■□□□□ 0.33
CACNB3P54284 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CACNB3P54284 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CACNB3P54284 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CACNB3P54284 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
CACNB3P54284 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms