Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
HDGFP51858 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.26■□□□□ 0.83
HDGFP51858 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC20.26■□□□□ 0.83
HDGFP51858 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC20.26■□□□□ 0.83
HDGFP51858 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC20.26■□□□□ 0.83
HDGFP51858 AP000244.1-201ENST00000424582 201 ntBASIC20.26■□□□□ 0.83
HDGFP51858 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC20.26■□□□□ 0.83
HDGFP51858 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC20.26■□□□□ 0.83
HDGFP51858 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HDGFP51858 AL132994.1-201ENST00000554098 400 ntBASIC20.26■□□□□ 0.83
HDGFP51858 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HDGFP51858 MBP-238ENST00000580402 915 ntTSL 5 BASIC20.26■□□□□ 0.83
HDGFP51858 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC20.26■□□□□ 0.83
HDGFP51858 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.26■□□□□ 0.83
HDGFP51858 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC20.26■□□□□ 0.83
HDGFP51858 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC20.26■□□□□ 0.83
HDGFP51858 CELP-203ENST00000624767 2414 ntTSL 5 BASIC20.26■□□□□ 0.83
HDGFP51858 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC20.26■□□□□ 0.83
HDGFP51858 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HDGFP51858 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC20.26■□□□□ 0.83
HDGFP51858 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HDGFP51858 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HDGFP51858 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDGFP51858 NFIC-211ENST00000641145 8399 ntBASIC20.25■□□□□ 0.83
HDGFP51858 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDGFP51858 DOC2GP-204ENST00000639052 2548 ntBASIC20.25■□□□□ 0.83
HDGFP51858 AC007952.5-201ENST00000572818 1486 ntBASIC20.25■□□□□ 0.83
HDGFP51858 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDGFP51858 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDGFP51858 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC20.25■□□□□ 0.83
HDGFP51858 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC20.25■□□□□ 0.83
HDGFP51858 PTGER4P2-201ENST00000328411 252 ntBASIC20.25■□□□□ 0.83
HDGFP51858 AL929302.1-201ENST00000426556 871 ntBASIC20.25■□□□□ 0.83
HDGFP51858 NME6-208ENST00000435684 599 ntTSL 2 BASIC20.25■□□□□ 0.83
HDGFP51858 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC20.25■□□□□ 0.83
HDGFP51858 PTGER4P3-201ENST00000458150 252 ntBASIC20.25■□□□□ 0.83
HDGFP51858 AC025186.1-201ENST00000478174 870 ntBASIC20.25■□□□□ 0.83
HDGFP51858 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC20.25■□□□□ 0.83
HDGFP51858 F11R-204ENST00000537746 1245 ntTSL 2 BASIC20.25■□□□□ 0.83
HDGFP51858 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDGFP51858 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC20.25■□□□□ 0.83
HDGFP51858 AL512310.5-201ENST00000551999 515 ntBASIC20.25■□□□□ 0.83
HDGFP51858 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC20.25■□□□□ 0.83
HDGFP51858 AC132825.4-202ENST00000578792 434 ntBASIC20.25■□□□□ 0.83
HDGFP51858 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC20.25■□□□□ 0.83
HDGFP51858 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDGFP51858 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HDGFP51858 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDGFP51858 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HDGFP51858 LINC00115-201ENST00000473798 1317 ntBASIC20.25■□□□□ 0.83
HDGFP51858 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HDGFP51858 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HDGFP51858 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 AC084018.2-201ENST00000613093 2607 ntBASIC20.24■□□□□ 0.83
HDGFP51858 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC20.24■□□□□ 0.83
HDGFP51858 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.24■□□□□ 0.83
HDGFP51858 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HDGFP51858 AMT-256ENST00000638063 1783 ntTSL 5 BASIC20.24■□□□□ 0.83
HDGFP51858 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC20.24■□□□□ 0.83
HDGFP51858 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.24■□□□□ 0.83
HDGFP51858 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HDGFP51858 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HDGFP51858 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC20.24■□□□□ 0.83
HDGFP51858 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC20.24■□□□□ 0.83
HDGFP51858 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC20.24■□□□□ 0.83
HDGFP51858 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC20.24■□□□□ 0.83
HDGFP51858 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC20.24■□□□□ 0.83
HDGFP51858 CASP16P-204ENST00000635032 809 ntBASIC20.24■□□□□ 0.83
HDGFP51858 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC20.24■□□□□ 0.83
HDGFP51858 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HDGFP51858 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HDGFP51858 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms