Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC140113.1-201ENST00000603467 169 ntBASIC16.02■□□□□ 0.16
CDK7P50613 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.02■□□□□ 0.16
CDK7P50613 AL451007.2-201ENST00000632004 563 ntBASIC16.02■□□□□ 0.16
CDK7P50613 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.02■□□□□ 0.16
CDK7P50613 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.02■□□□□ 0.15
CDK7P50613 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDK7P50613 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDK7P50613 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDK7P50613 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.02■□□□□ 0.15
CDK7P50613 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.02■□□□□ 0.15
CDK7P50613 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDK7P50613 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.02■□□□□ 0.15
CDK7P50613 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.02■□□□□ 0.15
CDK7P50613 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDK7P50613 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDK7P50613 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.02■□□□□ 0.15
CDK7P50613 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDK7P50613 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDK7P50613 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.02■□□□□ 0.15
CDK7P50613 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CDK7P50613 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CDK7P50613 AL136172.1-201ENST00000598590 1394 ntBASIC16.01■□□□□ 0.15
CDK7P50613 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.01■□□□□ 0.15
CDK7P50613 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK7P50613 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CDK7P50613 AC067930.6-201ENST00000623257 4947 ntBASIC16.01■□□□□ 0.15
CDK7P50613 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDK7P50613 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.01■□□□□ 0.15
CDK7P50613 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CDK7P50613 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK7P50613 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK7P50613 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.01■□□□□ 0.15
CDK7P50613 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CDK7P50613 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.01■□□□□ 0.15
CDK7P50613 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK7P50613 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.01■□□□□ 0.15
CDK7P50613 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.01■□□□□ 0.15
CDK7P50613 ERP29P1-201ENST00000442902 706 ntBASIC16.01■□□□□ 0.15
CDK7P50613 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.01■□□□□ 0.15
CDK7P50613 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.01■□□□□ 0.15
CDK7P50613 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK7P50613 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.01■□□□□ 0.15
CDK7P50613 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK7P50613 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDK7P50613 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK7P50613 AC068867.1-201ENST00000559855 150 ntBASIC16.01■□□□□ 0.15
CDK7P50613 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK7P50613 AC011247.3-201ENST00000603297 438 ntBASIC16.01■□□□□ 0.15
CDK7P50613 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.01■□□□□ 0.15
CDK7P50613 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CDK7P50613 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.01■□□□□ 0.15
CDK7P50613 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.01■□□□□ 0.15
CDK7P50613 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK7P50613 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDK7P50613 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDK7P50613 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDK7P50613 AC092135.3-201ENST00000624151 1846 ntBASIC16.01■□□□□ 0.15
CDK7P50613 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.01■□□□□ 0.15
CDK7P50613 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16■□□□□ 0.15
CDK7P50613 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CDK7P50613 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16■□□□□ 0.15
CDK7P50613 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CDK7P50613 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDK7P50613 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK7P50613 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16■□□□□ 0.15
CDK7P50613 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16■□□□□ 0.15
CDK7P50613 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK7P50613 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDK7P50613 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK7P50613 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CDK7P50613 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDK7P50613 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK7P50613 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CDK7P50613 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16■□□□□ 0.15
CDK7P50613 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK7P50613 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16■□□□□ 0.15
CDK7P50613 API5-208ENST00000531273 1868 ntTSL 2 BASIC16■□□□□ 0.15
CDK7P50613 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16■□□□□ 0.15
CDK7P50613 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDK7P50613 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDK7P50613 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms