Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC34P49427 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.61□□□□□ -0.55
CDC34P49427 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
CDC34P49427 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.61□□□□□ -0.55
CDC34P49427 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 PCDHB18P-202ENST00000526308 3197 ntBASIC11.61□□□□□ -0.55
CDC34P49427 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CDC34P49427 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 KRT8P35-201ENST00000483942 1338 ntBASIC11.6□□□□□ -0.55
CDC34P49427 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CDC34P49427 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC34P49427 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC34P49427 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CDC34P49427 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 AL358933.1-201ENST00000565046 2830 ntBASIC11.6□□□□□ -0.55
CDC34P49427 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC34P49427 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CDC34P49427 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC34P49427 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CDC34P49427 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 AL080243.2-201ENST00000418783 582 ntBASIC11.6□□□□□ -0.55
CDC34P49427 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.6□□□□□ -0.55
CDC34P49427 MED15P5-201ENST00000423150 992 ntBASIC11.6□□□□□ -0.55
CDC34P49427 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC34P49427 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC34P49427 KRT18P3-201ENST00000451602 1288 ntBASIC11.6□□□□□ -0.55
CDC34P49427 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CDC34P49427 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC34P49427 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.6□□□□□ -0.55
CDC34P49427 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.6□□□□□ -0.55
CDC34P49427 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.6□□□□□ -0.55
CDC34P49427 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.6□□□□□ -0.55
CDC34P49427 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.6□□□□□ -0.55
CDC34P49427 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CDC34P49427 AC004461.2-201ENST00000629517 803 ntBASIC11.6□□□□□ -0.55
CDC34P49427 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.6□□□□□ -0.55
CDC34P49427 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
CDC34P49427 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
CDC34P49427 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CDC34P49427 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC34P49427 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.6□□□□□ -0.55
CDC34P49427 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC34P49427 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CDC34P49427 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CDC34P49427 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CDC34P49427 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.6□□□□□ -0.55
CDC34P49427 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.6□□□□□ -0.55
CDC34P49427 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 NCLP1-201ENST00000445357 1963 ntBASIC11.59□□□□□ -0.55
CDC34P49427 AL445209.1-201ENST00000607269 3491 ntBASIC11.59□□□□□ -0.55
CDC34P49427 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
CDC34P49427 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC34P49427 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC34P49427 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 ZNF259P1-201ENST00000407656 1365 ntBASIC11.59□□□□□ -0.55
CDC34P49427 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC11.59□□□□□ -0.55
CDC34P49427 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CDC34P49427 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CDC34P49427 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.59□□□□□ -0.55
CDC34P49427 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC34P49427 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.59□□□□□ -0.55
CDC34P49427 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.59□□□□□ -0.55
CDC34P49427 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CDC34P49427 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms