Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC113935.1-201ENST00000471722 555 ntBASIC18.05■□□□□ 0.48
RFC4P35249 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.05■□□□□ 0.48
RFC4P35249 GDNF-207ENST00000515058 764 ntTSL 5 BASIC18.05■□□□□ 0.48
RFC4P35249 AC005740.1-201ENST00000515639 522 ntBASIC18.05■□□□□ 0.48
RFC4P35249 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC18.05■□□□□ 0.48
RFC4P35249 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC18.05■□□□□ 0.48
RFC4P35249 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.05■□□□□ 0.48
RFC4P35249 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC18.05■□□□□ 0.48
RFC4P35249 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.05■□□□□ 0.48
RFC4P35249 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC4P35249 SRP14-204ENST00000558720 780 ntTSL 2 BASIC18.05■□□□□ 0.48
RFC4P35249 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC18.05■□□□□ 0.48
RFC4P35249 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RFC4P35249 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RFC4P35249 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RFC4P35249 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RFC4P35249 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RFC4P35249 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RFC4P35249 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RFC4P35249 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.05■□□□□ 0.48
RFC4P35249 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC4P35249 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RFC4P35249 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RFC4P35249 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC4P35249 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.05■□□□□ 0.48
RFC4P35249 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC18.05■□□□□ 0.48
RFC4P35249 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RFC4P35249 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
RFC4P35249 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
RFC4P35249 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RFC4P35249 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
RFC4P35249 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC18.04■□□□□ 0.48
RFC4P35249 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 OR7E115P-201ENST00000382617 1024 ntBASIC18.04■□□□□ 0.48
RFC4P35249 AC006529.1-201ENST00000459978 637 ntBASIC18.04■□□□□ 0.48
RFC4P35249 FOXN3-AS2-201ENST00000554071 1262 ntBASIC18.04■□□□□ 0.48
RFC4P35249 MT2A-202ENST00000561491 581 ntTSL 2 BASIC18.04■□□□□ 0.48
RFC4P35249 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC18.04■□□□□ 0.48
RFC4P35249 MME-218ENST00000625667 363 ntTSL 5 BASIC18.04■□□□□ 0.48
RFC4P35249 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RFC4P35249 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC18.04■□□□□ 0.48
RFC4P35249 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RFC4P35249 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RFC4P35249 AC019109.1-201ENST00000401725 1874 ntBASIC18.03■□□□□ 0.48
RFC4P35249 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC18.03■□□□□ 0.48
RFC4P35249 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC4P35249 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
RFC4P35249 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.03■□□□□ 0.48
RFC4P35249 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RFC4P35249 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RFC4P35249 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 ODCP-201ENST00000459650 1639 ntBASIC18.03■□□□□ 0.48
RFC4P35249 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RFC4P35249 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC18.03■□□□□ 0.48
RFC4P35249 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC4P35249 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC18.03■□□□□ 0.48
RFC4P35249 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC18.03■□□□□ 0.48
RFC4P35249 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC4P35249 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC4P35249 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC18.03■□□□□ 0.48
RFC4P35249 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC18.03■□□□□ 0.48
RFC4P35249 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC18.03■□□□□ 0.48
RFC4P35249 AC068831.5-201ENST00000557387 328 ntBASIC18.03■□□□□ 0.48
RFC4P35249 AC027139.1-201ENST00000565286 951 ntBASIC18.03■□□□□ 0.48
RFC4P35249 COX5A-205ENST00000568517 582 ntTSL 3 BASIC18.03■□□□□ 0.48
RFC4P35249 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RFC4P35249 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RFC4P35249 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.03■□□□□ 0.48
RFC4P35249 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RFC4P35249 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC4P35249 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.03■□□□□ 0.48
RFC4P35249 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC18.03■□□□□ 0.48
RFC4P35249 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms