Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC19.22■□□□□ 0.67
USP6P35125 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP6P35125 FES-203ENST00000394302 2133 ntTSL 5 BASIC19.22■□□□□ 0.67
USP6P35125 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC19.22■□□□□ 0.67
USP6P35125 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC19.22■□□□□ 0.67
USP6P35125 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.22■□□□□ 0.67
USP6P35125 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP6P35125 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP6P35125 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP6P35125 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
USP6P35125 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC19.22■□□□□ 0.67
USP6P35125 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP6P35125 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.22■□□□□ 0.67
USP6P35125 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP6P35125 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP6P35125 SURF4-203ENST00000371991 715 ntTSL 3 BASIC19.22■□□□□ 0.67
USP6P35125 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP6P35125 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC19.22■□□□□ 0.67
USP6P35125 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC19.22■□□□□ 0.67
USP6P35125 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC19.22■□□□□ 0.67
USP6P35125 PFN2-212ENST00000490975 858 ntTSL 4 BASIC19.22■□□□□ 0.67
USP6P35125 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.22■□□□□ 0.67
USP6P35125 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC19.22■□□□□ 0.67
USP6P35125 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC19.22■□□□□ 0.67
USP6P35125 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.22■□□□□ 0.67
USP6P35125 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC19.22■□□□□ 0.67
USP6P35125 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC19.22■□□□□ 0.67
USP6P35125 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.22■□□□□ 0.67
USP6P35125 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP6P35125 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
USP6P35125 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC19.22■□□□□ 0.67
USP6P35125 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
USP6P35125 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
USP6P35125 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC19.21■□□□□ 0.67
USP6P35125 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP6P35125 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP6P35125 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP6P35125 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP6P35125 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC19.21■□□□□ 0.67
USP6P35125 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP6P35125 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC19.21■□□□□ 0.67
USP6P35125 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
USP6P35125 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP6P35125 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP6P35125 SERF2-206ENST00000409291 807 ntTSL 3 BASIC19.21■□□□□ 0.67
USP6P35125 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP6P35125 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC19.21■□□□□ 0.67
USP6P35125 KRT18P62-201ENST00000446618 1287 ntBASIC19.21■□□□□ 0.67
USP6P35125 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC19.21■□□□□ 0.67
USP6P35125 AGPAT5P1-201ENST00000455855 1019 ntBASIC19.21■□□□□ 0.67
USP6P35125 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC19.21■□□□□ 0.67
USP6P35125 FAM86B3P-203ENST00000523992 854 ntBASIC19.21■□□□□ 0.67
USP6P35125 BATF-202ENST00000555504 361 ntTSL 2 BASIC19.21■□□□□ 0.67
USP6P35125 DLK1-205ENST00000556051 469 ntTSL 2 BASIC19.21■□□□□ 0.67
USP6P35125 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP6P35125 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
USP6P35125 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP6P35125 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.21■□□□□ 0.67
USP6P35125 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
USP6P35125 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC19.21■□□□□ 0.67
USP6P35125 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP6P35125 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP6P35125 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP6P35125 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
USP6P35125 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC19.2■□□□□ 0.66
USP6P35125 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP6P35125 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP6P35125 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP6P35125 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP6P35125 AL365181.1-201ENST00000564032 1828 ntBASIC19.2■□□□□ 0.66
USP6P35125 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP6P35125 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP6P35125 OR7E115P-201ENST00000382617 1024 ntBASIC19.2■□□□□ 0.66
USP6P35125 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC19.2■□□□□ 0.66
USP6P35125 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC19.2■□□□□ 0.66
USP6P35125 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC19.2■□□□□ 0.66
USP6P35125 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC19.2■□□□□ 0.66
USP6P35125 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC19.2■□□□□ 0.66
USP6P35125 PEBP1P2-201ENST00000603980 558 ntBASIC19.2■□□□□ 0.66
USP6P35125 HMGB1P24-201ENST00000611897 328 ntBASIC19.2■□□□□ 0.66
USP6P35125 ETV2-207ENST00000619399 994 ntTSL 5 BASIC19.2■□□□□ 0.66
USP6P35125 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
USP6P35125 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
USP6P35125 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP6P35125 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP6P35125 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP6P35125 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP6P35125 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms