Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 TCAM1P-207ENST00000485295 1537 ntBASIC16.85■□□□□ 0.29
CDC27P30260 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDC27P30260 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
CDC27P30260 AC018629.1-201ENST00000623381 1736 ntBASIC16.84■□□□□ 0.29
CDC27P30260 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDC27P30260 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC27P30260 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDC27P30260 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC27P30260 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 AL157996.1-201ENST00000624684 2299 ntBASIC16.84■□□□□ 0.29
CDC27P30260 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC27P30260 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC27P30260 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDC27P30260 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC27P30260 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC27P30260 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC27P30260 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC27P30260 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC27P30260 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 SERPINA13P-202ENST00000478994 924 ntBASIC16.84■□□□□ 0.29
CDC27P30260 ZNF767P-206ENST00000513792 565 ntBASIC16.84■□□□□ 0.29
CDC27P30260 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC27P30260 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.84■□□□□ 0.29
CDC27P30260 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC27P30260 PGAM1P5-201ENST00000548011 764 ntBASIC16.84■□□□□ 0.29
CDC27P30260 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC27P30260 AL118558.3-201ENST00000607414 1079 ntBASIC16.84■□□□□ 0.29
CDC27P30260 AC090164.2-201ENST00000611487 516 ntBASIC16.84■□□□□ 0.29
CDC27P30260 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
CDC27P30260 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC27P30260 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDC27P30260 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.84■□□□□ 0.29
CDC27P30260 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC16.84■□□□□ 0.29
CDC27P30260 AC011474.4-201ENST00000623523 2076 ntBASIC16.84■□□□□ 0.29
CDC27P30260 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDC27P30260 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDC27P30260 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
CDC27P30260 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.83■□□□□ 0.29
CDC27P30260 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDC27P30260 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDC27P30260 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDC27P30260 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDC27P30260 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
CDC27P30260 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CDC27P30260 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC27P30260 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC27P30260 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CDC27P30260 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CDC27P30260 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.83■□□□□ 0.28
CDC27P30260 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
CDC27P30260 XBP1P1-201ENST00000436573 652 ntBASIC16.83■□□□□ 0.28
CDC27P30260 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.83■□□□□ 0.28
CDC27P30260 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDC27P30260 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.83■□□□□ 0.28
CDC27P30260 LAP3P2-201ENST00000454686 1454 ntBASIC16.83■□□□□ 0.28
CDC27P30260 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CDC27P30260 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.83■□□□□ 0.28
CDC27P30260 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC27P30260 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC27P30260 AC126915.1-201ENST00000522847 1038 ntBASIC16.83■□□□□ 0.28
CDC27P30260 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.83■□□□□ 0.28
CDC27P30260 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC27P30260 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC27P30260 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.83■□□□□ 0.28
CDC27P30260 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDC27P30260 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms