Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RAB40ALP0C0E4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 CYP4F23P-201ENST00000593402 1579 ntBASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 AL590440.2-201ENST00000641973 1595 ntBASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 AL136172.1-201ENST00000598590 1394 ntBASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 AHCYP4-201ENST00000419201 1315 ntBASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 AC073150.1-201ENST00000450406 1084 ntBASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 MIR3188-201ENST00000583494 85 ntBASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 AC007686.3-201ENST00000619017 3487 ntBASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40ALP0C0E4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 CEP164P1-201ENST00000455142 418 ntBASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
RAB40ALP0C0E4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms