Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.8□□□□□ -0.36
SFTPBP07988 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.8□□□□□ -0.36
SFTPBP07988 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.8□□□□□ -0.36
SFTPBP07988 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.8□□□□□ -0.36
SFTPBP07988 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.8□□□□□ -0.36
SFTPBP07988 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.8□□□□□ -0.36
SFTPBP07988 AL139094.1-201ENST00000405549 1188 ntBASIC12.8□□□□□ -0.36
SFTPBP07988 AC134915.1-201ENST00000426461 574 ntBASIC12.8□□□□□ -0.36
SFTPBP07988 AL442647.2-201ENST00000429864 857 ntBASIC12.8□□□□□ -0.36
SFTPBP07988 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.8□□□□□ -0.36
SFTPBP07988 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.8□□□□□ -0.36
SFTPBP07988 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.8□□□□□ -0.36
SFTPBP07988 AC133539.2-201ENST00000604757 467 ntBASIC12.8□□□□□ -0.36
SFTPBP07988 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.8□□□□□ -0.36
SFTPBP07988 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.8□□□□□ -0.36
SFTPBP07988 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.8□□□□□ -0.36
SFTPBP07988 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.8□□□□□ -0.36
SFTPBP07988 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SFTPBP07988 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SFTPBP07988 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.8□□□□□ -0.36
SFTPBP07988 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.8□□□□□ -0.36
SFTPBP07988 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.8□□□□□ -0.36
SFTPBP07988 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SFTPBP07988 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.79□□□□□ -0.36
SFTPBP07988 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SFTPBP07988 OR8S1-201ENST00000310194 1080 ntBASIC12.79□□□□□ -0.36
SFTPBP07988 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 C1QBPP1-201ENST00000400117 770 ntBASIC12.79□□□□□ -0.36
SFTPBP07988 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.79□□□□□ -0.36
SFTPBP07988 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.79□□□□□ -0.36
SFTPBP07988 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.79□□□□□ -0.36
SFTPBP07988 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 AP001582.1-201ENST00000525856 295 ntBASIC12.79□□□□□ -0.36
SFTPBP07988 DUX4L47-201ENST00000566374 394 ntBASIC12.79□□□□□ -0.36
SFTPBP07988 AC010319.3-201ENST00000597028 470 ntBASIC12.79□□□□□ -0.36
SFTPBP07988 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.79□□□□□ -0.36
SFTPBP07988 CU634019.7-201ENST00000624153 1185 ntBASIC12.79□□□□□ -0.36
SFTPBP07988 FP236241.2-201ENST00000624906 1185 ntBASIC12.79□□□□□ -0.36
SFTPBP07988 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.79□□□□□ -0.36
SFTPBP07988 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.79□□□□□ -0.36
SFTPBP07988 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SFTPBP07988 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.79□□□□□ -0.36
SFTPBP07988 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 AC152010.1-201ENST00000415779 2006 ntBASIC12.79□□□□□ -0.36
SFTPBP07988 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.79□□□□□ -0.36
SFTPBP07988 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SFTPBP07988 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SFTPBP07988 CICP8-201ENST00000455800 2813 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms