Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 AC015909.3-201ENST00000572855 1794 ntBASIC17.42■□□□□ 0.38
CHGBP05060 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 KRT8P21-201ENST00000430398 1491 ntBASIC17.42■□□□□ 0.38
CHGBP05060 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CHGBP05060 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.42■□□□□ 0.38
CHGBP05060 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.42■□□□□ 0.38
CHGBP05060 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHGBP05060 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CHGBP05060 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHGBP05060 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CHGBP05060 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CHGBP05060 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.41■□□□□ 0.38
CHGBP05060 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.41■□□□□ 0.38
CHGBP05060 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.41■□□□□ 0.38
CHGBP05060 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.41■□□□□ 0.38
CHGBP05060 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.41■□□□□ 0.38
CHGBP05060 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.41■□□□□ 0.38
CHGBP05060 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CHGBP05060 MIR6074-201ENST00000612054 107 ntBASIC17.41■□□□□ 0.38
CHGBP05060 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 AC020910.6-201ENST00000623084 1459 ntBASIC17.41■□□□□ 0.38
CHGBP05060 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 AL157791.1-201ENST00000553667 1699 ntBASIC17.41■□□□□ 0.38
CHGBP05060 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHGBP05060 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.41■□□□□ 0.38
CHGBP05060 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CHGBP05060 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CHGBP05060 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHGBP05060 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHGBP05060 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC17.4■□□□□ 0.38
CHGBP05060 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC17.4■□□□□ 0.38
CHGBP05060 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHGBP05060 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CHGBP05060 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CHGBP05060 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.4■□□□□ 0.38
CHGBP05060 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.4■□□□□ 0.38
CHGBP05060 AC012618.1-201ENST00000461223 412 ntBASIC17.4■□□□□ 0.38
CHGBP05060 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.4■□□□□ 0.38
CHGBP05060 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CHGBP05060 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.4■□□□□ 0.38
CHGBP05060 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.4■□□□□ 0.38
CHGBP05060 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.4■□□□□ 0.38
CHGBP05060 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 AP001505.2-201ENST00000616815 443 ntBASIC17.4■□□□□ 0.38
CHGBP05060 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.4■□□□□ 0.38
CHGBP05060 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CHGBP05060 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 AL133338.1-201ENST00000565695 1517 ntBASIC17.4■□□□□ 0.38
CHGBP05060 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.4■□□□□ 0.38
CHGBP05060 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHGBP05060 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.4■□□□□ 0.38
CHGBP05060 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CHGBP05060 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHGBP05060 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms