Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.6□□□□□ -0.55
IFNA1P01562 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
IFNA1P01562 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.6□□□□□ -0.55
IFNA1P01562 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
IFNA1P01562 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.6□□□□□ -0.55
IFNA1P01562 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.6□□□□□ -0.55
IFNA1P01562 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
IFNA1P01562 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
IFNA1P01562 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 CSPG4P13-202ENST00000567704 4801 ntBASIC11.59□□□□□ -0.55
IFNA1P01562 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.59□□□□□ -0.55
IFNA1P01562 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.59□□□□□ -0.55
IFNA1P01562 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
IFNA1P01562 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.59□□□□□ -0.55
IFNA1P01562 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
IFNA1P01562 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
IFNA1P01562 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.59□□□□□ -0.55
IFNA1P01562 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
IFNA1P01562 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
IFNA1P01562 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.59□□□□□ -0.55
IFNA1P01562 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC11.59□□□□□ -0.55
IFNA1P01562 AF238378.1-201ENST00000526806 358 ntBASIC11.59□□□□□ -0.55
IFNA1P01562 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
IFNA1P01562 AC012640.2-201ENST00000561606 901 ntBASIC11.59□□□□□ -0.55
IFNA1P01562 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.59□□□□□ -0.55
IFNA1P01562 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 MIR3652-201ENST00000579335 131 ntBASIC11.59□□□□□ -0.55
IFNA1P01562 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 TP73-AS1-207ENST00000624167 988 ntBASIC11.59□□□□□ -0.55
IFNA1P01562 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.59□□□□□ -0.55
IFNA1P01562 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
IFNA1P01562 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.59□□□□□ -0.55
IFNA1P01562 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 AL157414.3-201ENST00000624276 1954 ntBASIC11.59□□□□□ -0.55
IFNA1P01562 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
IFNA1P01562 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 AL137783.1-201ENST00000623494 1896 ntBASIC11.59□□□□□ -0.55
IFNA1P01562 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
IFNA1P01562 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.59□□□□□ -0.55
IFNA1P01562 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
IFNA1P01562 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
IFNA1P01562 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
IFNA1P01562 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms