Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCHNA4D1U4 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCHNA4D1U4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.49■□□□□ 0.07
LCHNA4D1U4 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LCHNA4D1U4 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC15.49■□□□□ 0.07
LCHNA4D1U4 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LCHNA4D1U4 AC018638.5-201ENST00000450885 754 ntBASIC15.49■□□□□ 0.07
LCHNA4D1U4 AL135901.1-201ENST00000451812 333 ntBASIC15.49■□□□□ 0.07
LCHNA4D1U4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.49■□□□□ 0.07
LCHNA4D1U4 AC244197.1-201ENST00000456494 951 ntBASIC15.49■□□□□ 0.07
LCHNA4D1U4 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.49■□□□□ 0.07
LCHNA4D1U4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.49■□□□□ 0.07
LCHNA4D1U4 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15.49■□□□□ 0.07
LCHNA4D1U4 AC027139.1-201ENST00000565286 951 ntBASIC15.49■□□□□ 0.07
LCHNA4D1U4 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
LCHNA4D1U4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.49■□□□□ 0.07
LCHNA4D1U4 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.49■□□□□ 0.07
LCHNA4D1U4 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCHNA4D1U4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.49■□□□□ 0.07
LCHNA4D1U4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCHNA4D1U4 TNRC18P2-201ENST00000417666 2714 ntBASIC15.49■□□□□ 0.07
LCHNA4D1U4 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCHNA4D1U4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCHNA4D1U4 AL672207.1-201ENST00000328462 1570 ntBASIC15.49■□□□□ 0.07
LCHNA4D1U4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCHNA4D1U4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
LCHNA4D1U4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LCHNA4D1U4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCHNA4D1U4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LCHNA4D1U4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 RN7SL665P-201ENST00000578793 300 ntBASIC15.48■□□□□ 0.07
LCHNA4D1U4 AL139339.2-201ENST00000608063 657 ntBASIC15.48■□□□□ 0.07
LCHNA4D1U4 AL118522.1-201ENST00000611368 560 ntBASIC15.48■□□□□ 0.07
LCHNA4D1U4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.48■□□□□ 0.07
LCHNA4D1U4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCHNA4D1U4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCHNA4D1U4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCHNA4D1U4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCHNA4D1U4 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCHNA4D1U4 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCHNA4D1U4 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCHNA4D1U4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCHNA4D1U4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCHNA4D1U4 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCHNA4D1U4 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.47■□□□□ 0.07
LCHNA4D1U4 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms