Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 AL133466.1-201ENST00000447582 150 ntBASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 RN7SL11P-201ENST00000471305 293 ntBASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 RN7SL720P-201ENST00000488178 304 ntBASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 FGFR3P5-201ENST00000564496 886 ntBASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 AC008825.2-201ENST00000603374 718 ntBASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 ZACNP1-201ENST00000612259 710 ntBASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 AC128714.1-201ENST00000637035 887 ntBASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 AC152010.1-201ENST00000415779 2006 ntBASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 RPS2P36-201ENST00000456516 831 ntBASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 TMEM198B-204ENST00000484016 896 ntBASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 MIR5572-201ENST00000583188 137 ntBASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 AC073413.1-201ENST00000603927 732 ntBASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 KRT8P4-201ENST00000509735 1454 ntBASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCDHB1Q9Y5F3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms