Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HPS1Q92902 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.57□□□□□ -0.24
HPS1Q92902 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HPS1Q92902 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
HPS1Q92902 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 AC073548.1-201ENST00000624088 1882 ntBASIC13.57□□□□□ -0.24
HPS1Q92902 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
HPS1Q92902 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HPS1Q92902 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
HPS1Q92902 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
HPS1Q92902 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 AL691432.1-201ENST00000596308 1422 ntBASIC13.56□□□□□ -0.24
HPS1Q92902 CU639417.3-201ENST00000624240 1404 ntBASIC13.56□□□□□ -0.24
HPS1Q92902 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.56□□□□□ -0.24
HPS1Q92902 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.56□□□□□ -0.24
HPS1Q92902 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
HPS1Q92902 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HPS1Q92902 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HPS1Q92902 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.56□□□□□ -0.24
HPS1Q92902 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HPS1Q92902 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
HPS1Q92902 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.56□□□□□ -0.24
HPS1Q92902 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC13.56□□□□□ -0.24
HPS1Q92902 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HPS1Q92902 RN7SL692P-201ENST00000464677 288 ntBASIC13.56□□□□□ -0.24
HPS1Q92902 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC13.56□□□□□ -0.24
HPS1Q92902 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC13.56□□□□□ -0.24
HPS1Q92902 AC009407.1-201ENST00000568958 598 ntBASIC13.56□□□□□ -0.24
HPS1Q92902 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC13.56□□□□□ -0.24
HPS1Q92902 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HPS1Q92902 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.56□□□□□ -0.24
HPS1Q92902 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
HPS1Q92902 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
HPS1Q92902 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
HPS1Q92902 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.56□□□□□ -0.24
HPS1Q92902 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
HPS1Q92902 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.56□□□□□ -0.24
HPS1Q92902 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.56□□□□□ -0.24
HPS1Q92902 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 AL391825.1-201ENST00000457671 1364 ntBASIC13.56□□□□□ -0.24
HPS1Q92902 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HPS1Q92902 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.56□□□□□ -0.24
HPS1Q92902 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.55□□□□□ -0.24
HPS1Q92902 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HPS1Q92902 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HPS1Q92902 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HPS1Q92902 CYP4F24P-201ENST00000586049 1580 ntBASIC13.55□□□□□ -0.24
HPS1Q92902 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 AC018529.2-202ENST00000611482 3087 ntBASIC13.55□□□□□ -0.24
HPS1Q92902 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 VENTXP1-201ENST00000569334 2716 ntBASIC13.55□□□□□ -0.24
HPS1Q92902 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HPS1Q92902 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HPS1Q92902 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms