Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 DUX4L50-201ENST00000455245 715 ntBASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 ORAOV1P1-201ENST00000503108 395 ntBASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 MRPL37P1-201ENST00000592451 1337 ntBASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SYNPOQ8N3V7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 PIN4P1-201ENST00000451079 396 ntBASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 MIR6756-201ENST00000616240 63 ntBASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SYNPOQ8N3V7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 LINC01815-202ENST00000641468 1409 ntBASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.78□□□□□ -0.04
SYNPOQ8N3V7 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms