Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 AC068760.1-201ENST00000493579 1953 ntBASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TMEM53Q6P2H8 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 MTHFR-210ENST00000641407 2387 ntBASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 AC123567.1-201ENST00000548294 1261 ntBASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TMEM53Q6P2H8 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM53Q6P2H8 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.52□□□□□ -0.24
TMEM53Q6P2H8 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM53Q6P2H8 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM53Q6P2H8 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.52□□□□□ -0.24
TMEM53Q6P2H8 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TMEM53Q6P2H8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TMEM53Q6P2H8 KRT8P44-201ENST00000441609 1350 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms