Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 PGAM1P11-201ENST00000416729 680 ntBASIC21.3■■□□□ 1
CDC42BPAQ5VT25 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 NAV1-210ENST00000593583 726 ntBASIC21.3■■□□□ 1
CDC42BPAQ5VT25 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 AC073869.4-201ENST00000620841 800 ntBASIC21.3■■□□□ 1
CDC42BPAQ5VT25 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 HSPA8P5-201ENST00000456928 2069 ntBASIC21.3■■□□□ 1
CDC42BPAQ5VT25 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDC42BPAQ5VT25 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 AC103563.1-201ENST00000429316 123 ntBASIC21.29■■□□□ 1
CDC42BPAQ5VT25 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 DGAT2L7P-201ENST00000602462 744 ntBASIC21.29■■□□□ 1
CDC42BPAQ5VT25 GARS-210ENST00000627489 324 ntTSL 4 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 DKKL1P1-201ENST00000400550 698 ntBASIC21.29■■□□□ 1
CDC42BPAQ5VT25 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDC42BPAQ5VT25 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 AC113367.3-201ENST00000508316 1912 ntBASIC21.28■■□□□ 1
CDC42BPAQ5VT25 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 HNRNPA1P5-201ENST00000558213 966 ntBASIC21.28■■□□□ 1
CDC42BPAQ5VT25 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 MIR4746-201ENST00000579802 71 ntBASIC21.28■■□□□ 1
CDC42BPAQ5VT25 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 PRMT1P1-201ENST00000604252 1009 ntBASIC21.28■■□□□ 1
CDC42BPAQ5VT25 AC090510.3-201ENST00000615831 821 ntBASIC21.28■■□□□ 1
CDC42BPAQ5VT25 Z98885.3-201ENST00000624882 1757 ntBASIC21.28■■□□□ 1
CDC42BPAQ5VT25 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDC42BPAQ5VT25 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms