Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AC092384.3-202ENST00000564646 2873 ntBASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 SNORA57-201ENST00000383870 149 ntBASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 KRT18P33-201ENST00000398525 1043 ntBASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 HNRNPA1P21-201ENST00000424115 961 ntBASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
VPS13DQ5THJ4 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 FAM197Y6-201ENST00000420524 766 ntBASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AC099328.1-201ENST00000498809 1030 ntBASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 RN7SL300P-201ENST00000582522 318 ntBASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 URAHP-205ENST00000610227 398 ntBASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AC106782.5-201ENST00000616011 337 ntBASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 RNA5SP491-201ENST00000362936 118 ntBASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 CD81-209ENST00000492627 886 ntTSL 3 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AC142086.5-202ENST00000562500 217 ntBASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AL050341.2-201ENST00000567508 1541 ntBASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AIG1-203ENST00000367596 559 ntTSL 2 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 AC022447.6-201ENST00000515522 438 ntBASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 DDX11L8-201ENST00000535849 366 ntBASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 MIR4254-201ENST00000581063 76 ntBASIC9.42□□□□□ -0.9
VPS13DQ5THJ4 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms