Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.82□□□□□ -0.36
DEFA1P59665 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.82□□□□□ -0.36
DEFA1P59665 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 AL359845.1-201ENST00000458202 1648 ntBASIC12.82□□□□□ -0.36
DEFA1P59665 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
DEFA1P59665 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
DEFA1P59665 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC12.82□□□□□ -0.36
DEFA1P59665 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.82□□□□□ -0.36
DEFA1P59665 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
DEFA1P59665 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
DEFA1P59665 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.82□□□□□ -0.36
DEFA1P59665 KRT18P27-201ENST00000427733 1299 ntBASIC12.82□□□□□ -0.36
DEFA1P59665 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.82□□□□□ -0.36
DEFA1P59665 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.82□□□□□ -0.36
DEFA1P59665 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
DEFA1P59665 AP000867.3-201ENST00000524675 377 ntBASIC12.82□□□□□ -0.36
DEFA1P59665 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.82□□□□□ -0.36
DEFA1P59665 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.82□□□□□ -0.36
DEFA1P59665 MIR4497-201ENST00000583208 89 ntBASIC12.82□□□□□ -0.36
DEFA1P59665 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.82□□□□□ -0.36
DEFA1P59665 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DEFA1P59665 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.82□□□□□ -0.36
DEFA1P59665 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC12.82□□□□□ -0.36
DEFA1P59665 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.82□□□□□ -0.36
DEFA1P59665 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.82□□□□□ -0.36
DEFA1P59665 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.82□□□□□ -0.36
DEFA1P59665 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.82□□□□□ -0.36
DEFA1P59665 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.82□□□□□ -0.36
DEFA1P59665 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.82□□□□□ -0.36
DEFA1P59665 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 AL021155.1-201ENST00000438808 2637 ntBASIC12.82□□□□□ -0.36
DEFA1P59665 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DEFA1P59665 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
DEFA1P59665 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
DEFA1P59665 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 AL445250.1-201ENST00000641671 2259 ntBASIC12.81□□□□□ -0.36
DEFA1P59665 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA1P59665 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA1P59665 AC073621.1-201ENST00000392730 636 ntBASIC12.81□□□□□ -0.36
DEFA1P59665 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 MIR935-201ENST00000401179 91 ntBASIC12.81□□□□□ -0.36
DEFA1P59665 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.81□□□□□ -0.36
DEFA1P59665 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA1P59665 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA1P59665 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA1P59665 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.81□□□□□ -0.36
DEFA1P59665 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 AC005363.2-201ENST00000618631 242 ntBASIC12.81□□□□□ -0.36
DEFA1P59665 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 AC107918.4-202ENST00000641623 219 ntBASIC12.81□□□□□ -0.36
DEFA1P59665 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA1P59665 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.81□□□□□ -0.36
DEFA1P59665 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
DEFA1P59665 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DEFA1P59665 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.81□□□□□ -0.36
DEFA1P59665 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DEFA1P59665 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.8□□□□□ -0.36
DEFA1P59665 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms