Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM11AP58511 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM11AP58511 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.52□□□□□ -0.24
SMIM11AP58511 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
SMIM11AP58511 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM11AP58511 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM11AP58511 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
SMIM11AP58511 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SMIM11AP58511 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM11AP58511 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM11AP58511 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SMIM11AP58511 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.52□□□□□ -0.25
SMIM11AP58511 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SMIM11AP58511 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.52□□□□□ -0.25
SMIM11AP58511 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM11AP58511 MESTP3-201ENST00000503460 968 ntBASIC13.52□□□□□ -0.25
SMIM11AP58511 AP001063.1-201ENST00000568332 529 ntBASIC13.52□□□□□ -0.25
SMIM11AP58511 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.52□□□□□ -0.25
SMIM11AP58511 AC138696.2-201ENST00000607376 223 ntBASIC13.52□□□□□ -0.25
SMIM11AP58511 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM11AP58511 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.52□□□□□ -0.25
SMIM11AP58511 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.52□□□□□ -0.25
SMIM11AP58511 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM11AP58511 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.52□□□□□ -0.25
SMIM11AP58511 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM11AP58511 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SMIM11AP58511 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM11AP58511 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM11AP58511 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SMIM11AP58511 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SMIM11AP58511 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.52□□□□□ -0.25
SMIM11AP58511 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SMIM11AP58511 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM11AP58511 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SMIM11AP58511 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
SMIM11AP58511 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SMIM11AP58511 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SMIM11AP58511 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SMIM11AP58511 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SMIM11AP58511 RN7SKP230-201ENST00000365642 335 ntBASIC13.51□□□□□ -0.25
SMIM11AP58511 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM11AP58511 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.51□□□□□ -0.25
SMIM11AP58511 AC245100.3-201ENST00000441281 285 ntBASIC13.51□□□□□ -0.25
SMIM11AP58511 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM11AP58511 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM11AP58511 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM11AP58511 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM11AP58511 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.51□□□□□ -0.25
SMIM11AP58511 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM11AP58511 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SMIM11AP58511 AP001160.2-201ENST00000596071 487 ntBASIC13.51□□□□□ -0.25
SMIM11AP58511 MIR8072-201ENST00000614241 80 ntBASIC13.51□□□□□ -0.25
SMIM11AP58511 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM11AP58511 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.51□□□□□ -0.25
SMIM11AP58511 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SMIM11AP58511 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM11AP58511 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SMIM11AP58511 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SMIM11AP58511 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SMIM11AP58511 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM11AP58511 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM11AP58511 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.51□□□□□ -0.25
SMIM11AP58511 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SMIM11AP58511 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SMIM11AP58511 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SMIM11AP58511 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms