Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GTF2A1P52655 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 AP3S2-216ENST00000617003 1561 ntBASIC14.36□□□□□ -0.11
GTF2A1P52655 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
GTF2A1P52655 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
GTF2A1P52655 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.36□□□□□ -0.11
GTF2A1P52655 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.36□□□□□ -0.11
GTF2A1P52655 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.36□□□□□ -0.11
GTF2A1P52655 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.36□□□□□ -0.11
GTF2A1P52655 AC021087.4-201ENST00000563761 564 ntBASIC14.36□□□□□ -0.11
GTF2A1P52655 AC006557.2-201ENST00000592985 1240 ntBASIC14.36□□□□□ -0.11
GTF2A1P52655 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.36□□□□□ -0.11
GTF2A1P52655 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.36□□□□□ -0.11
GTF2A1P52655 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 GHET1-201ENST00000627071 1906 ntBASIC14.36□□□□□ -0.11
GTF2A1P52655 PITX2-202ENST00000354925 3359 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC14.36□□□□□ -0.11
GTF2A1P52655 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 KIF28P-202ENST00000504864 3064 ntBASIC14.36□□□□□ -0.11
GTF2A1P52655 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC14.36□□□□□ -0.11
GTF2A1P52655 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC14.36□□□□□ -0.11
GTF2A1P52655 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GTF2A1P52655 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC14.35□□□□□ -0.11
GTF2A1P52655 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC14.35□□□□□ -0.11
GTF2A1P52655 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.35□□□□□ -0.11
GTF2A1P52655 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC14.35□□□□□ -0.11
GTF2A1P52655 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
GTF2A1P52655 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GTF2A1P52655 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GTF2A1P52655 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.35□□□□□ -0.11
GTF2A1P52655 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
GTF2A1P52655 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.35□□□□□ -0.11
GTF2A1P52655 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.35□□□□□ -0.11
GTF2A1P52655 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.35□□□□□ -0.11
GTF2A1P52655 SPTSSB-204ENST00000617024 1292 ntBASIC14.35□□□□□ -0.11
GTF2A1P52655 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.35□□□□□ -0.11
GTF2A1P52655 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.35□□□□□ -0.11
GTF2A1P52655 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.35□□□□□ -0.11
GTF2A1P52655 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.35□□□□□ -0.11
GTF2A1P52655 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC14.35□□□□□ -0.11
GTF2A1P52655 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC14.35□□□□□ -0.11
GTF2A1P52655 DBIL5P-203ENST00000536214 2677 ntBASIC14.35□□□□□ -0.11
GTF2A1P52655 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GTF2A1P52655 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GTF2A1P52655 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC14.35□□□□□ -0.11
GTF2A1P52655 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms