Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 DUT-208ENST00000559540 1441 ntTSL 2 BASIC19.25■□□□□ 0.67
USP6P35125 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC19.25■□□□□ 0.67
USP6P35125 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC19.25■□□□□ 0.67
USP6P35125 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.25■□□□□ 0.67
USP6P35125 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
USP6P35125 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC19.25■□□□□ 0.67
USP6P35125 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
USP6P35125 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC19.25■□□□□ 0.67
USP6P35125 KRT18P15-201ENST00000458108 1291 ntBASIC19.25■□□□□ 0.67
USP6P35125 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC19.25■□□□□ 0.67
USP6P35125 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC19.25■□□□□ 0.67
USP6P35125 GOLGA2P8-201ENST00000505201 779 ntBASIC19.25■□□□□ 0.67
USP6P35125 RN7SKP155-201ENST00000516031 288 ntBASIC19.25■□□□□ 0.67
USP6P35125 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP6P35125 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC19.25■□□□□ 0.67
USP6P35125 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.25■□□□□ 0.67
USP6P35125 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 RN7SL556P-201ENST00000582856 298 ntBASIC19.25■□□□□ 0.67
USP6P35125 AL031673.1-201ENST00000611460 466 ntBASIC19.25■□□□□ 0.67
USP6P35125 MIR6746-201ENST00000620971 63 ntBASIC19.25■□□□□ 0.67
USP6P35125 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
USP6P35125 TBC1D27-202ENST00000424239 1573 ntBASIC19.24■□□□□ 0.67
USP6P35125 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP6P35125 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
USP6P35125 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC19.24■□□□□ 0.67
USP6P35125 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP6P35125 AC138761.6-201ENST00000583997 1423 ntBASIC19.24■□□□□ 0.67
USP6P35125 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
USP6P35125 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 AC073210.1-201ENST00000414799 232 ntBASIC19.24■□□□□ 0.67
USP6P35125 RN7SL582P-201ENST00000491078 279 ntBASIC19.24■□□□□ 0.67
USP6P35125 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
USP6P35125 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC19.24■□□□□ 0.67
USP6P35125 AC106047.2-201ENST00000511723 743 ntBASIC19.24■□□□□ 0.67
USP6P35125 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
USP6P35125 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 AP005264.6-204ENST00000588436 719 ntBASIC19.24■□□□□ 0.67
USP6P35125 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC19.24■□□□□ 0.67
USP6P35125 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP6P35125 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.24■□□□□ 0.67
USP6P35125 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.24■□□□□ 0.67
USP6P35125 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.24■□□□□ 0.67
USP6P35125 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
USP6P35125 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.23■□□□□ 0.67
USP6P35125 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.23■□□□□ 0.67
USP6P35125 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC19.23■□□□□ 0.67
USP6P35125 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC19.23■□□□□ 0.67
USP6P35125 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
USP6P35125 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
USP6P35125 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC19.23■□□□□ 0.67
USP6P35125 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC19.23■□□□□ 0.67
USP6P35125 AC010632.2-201ENST00000588369 1224 ntBASIC19.23■□□□□ 0.67
USP6P35125 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
USP6P35125 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
USP6P35125 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.23■□□□□ 0.67
USP6P35125 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
USP6P35125 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC19.23■□□□□ 0.67
USP6P35125 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC19.23■□□□□ 0.67
USP6P35125 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms