Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HOXC8P31273 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.63■□□□□ 0.09
HOXC8P31273 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.62■□□□□ 0.09
HOXC8P31273 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HOXC8P31273 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
HOXC8P31273 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
HOXC8P31273 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.62■□□□□ 0.09
HOXC8P31273 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.62■□□□□ 0.09
HOXC8P31273 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.62■□□□□ 0.09
HOXC8P31273 AC092573.1-201ENST00000433054 884 ntBASIC15.62■□□□□ 0.09
HOXC8P31273 AL135901.1-201ENST00000451812 333 ntBASIC15.62■□□□□ 0.09
HOXC8P31273 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.62■□□□□ 0.09
HOXC8P31273 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.62■□□□□ 0.09
HOXC8P31273 GOLGA2P8-201ENST00000505201 779 ntBASIC15.62■□□□□ 0.09
HOXC8P31273 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.62■□□□□ 0.09
HOXC8P31273 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.62■□□□□ 0.09
HOXC8P31273 AL118522.1-201ENST00000611368 560 ntBASIC15.62■□□□□ 0.09
HOXC8P31273 FO393412.1-201ENST00000619841 382 ntBASIC15.62■□□□□ 0.09
HOXC8P31273 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.62■□□□□ 0.09
HOXC8P31273 AC002472.4-201ENST00000641915 272 ntBASIC15.62■□□□□ 0.09
HOXC8P31273 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.62■□□□□ 0.09
HOXC8P31273 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HOXC8P31273 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HOXC8P31273 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.62■□□□□ 0.09
HOXC8P31273 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HOXC8P31273 AL022313.4-201ENST00000562756 2046 ntBASIC15.61■□□□□ 0.09
HOXC8P31273 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.61■□□□□ 0.09
HOXC8P31273 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HOXC8P31273 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HOXC8P31273 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HOXC8P31273 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HOXC8P31273 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
HOXC8P31273 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HOXC8P31273 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
HOXC8P31273 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HOXC8P31273 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
HOXC8P31273 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
HOXC8P31273 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.61■□□□□ 0.09
HOXC8P31273 OR52M2P-201ENST00000414298 959 ntBASIC15.61■□□□□ 0.09
HOXC8P31273 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC15.61■□□□□ 0.09
HOXC8P31273 AC025186.1-201ENST00000478174 870 ntBASIC15.61■□□□□ 0.09
HOXC8P31273 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC15.61■□□□□ 0.09
HOXC8P31273 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC15.61■□□□□ 0.09
HOXC8P31273 AC005357.2-202ENST00000590507 1060 ntBASIC15.61■□□□□ 0.09
HOXC8P31273 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HOXC8P31273 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HOXC8P31273 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HOXC8P31273 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HOXC8P31273 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HOXC8P31273 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
HOXC8P31273 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HOXC8P31273 AL672207.1-201ENST00000328462 1570 ntBASIC15.61■□□□□ 0.09
HOXC8P31273 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HOXC8P31273 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HOXC8P31273 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.61■□□□□ 0.09
HOXC8P31273 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HOXC8P31273 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HOXC8P31273 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HOXC8P31273 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HOXC8P31273 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HOXC8P31273 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HOXC8P31273 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HOXC8P31273 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HOXC8P31273 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.6■□□□□ 0.09
HOXC8P31273 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HOXC8P31273 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HOXC8P31273 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HOXC8P31273 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
HOXC8P31273 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HOXC8P31273 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HOXC8P31273 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.6■□□□□ 0.09
HOXC8P31273 AC108734.2-201ENST00000420887 1069 ntBASIC15.6■□□□□ 0.09
HOXC8P31273 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HOXC8P31273 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.6■□□□□ 0.09
HOXC8P31273 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.6■□□□□ 0.09
HOXC8P31273 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.6■□□□□ 0.09
HOXC8P31273 AL009176.1-201ENST00000607876 650 ntBASIC15.6■□□□□ 0.09
HOXC8P31273 AC244250.3-201ENST00000620749 366 ntBASIC15.6■□□□□ 0.09
HOXC8P31273 AC073592.2-201ENST00000623062 780 ntBASIC15.6■□□□□ 0.09
HOXC8P31273 AC011471.3-201ENST00000623576 402 ntBASIC15.6■□□□□ 0.09
HOXC8P31273 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HOXC8P31273 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.6■□□□□ 0.09
HOXC8P31273 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HOXC8P31273 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HOXC8P31273 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HOXC8P31273 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
HOXC8P31273 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HOXC8P31273 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms