Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.03■□□□□ 0.16
CLTAP09496 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.03■□□□□ 0.16
CLTAP09496 AP001258.2-201ENST00000529891 490 ntBASIC16.03■□□□□ 0.16
CLTAP09496 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
CLTAP09496 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.03■□□□□ 0.16
CLTAP09496 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 AC010327.5-201ENST00000586923 3061 ntBASIC16.03■□□□□ 0.16
CLTAP09496 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
CLTAP09496 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CLTAP09496 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 AC113367.3-201ENST00000508316 1912 ntBASIC16.03■□□□□ 0.16
CLTAP09496 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLTAP09496 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
CLTAP09496 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLTAP09496 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLTAP09496 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.03■□□□□ 0.16
CLTAP09496 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLTAP09496 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.02■□□□□ 0.16
CLTAP09496 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CLTAP09496 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CLTAP09496 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.02■□□□□ 0.16
CLTAP09496 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.02■□□□□ 0.16
CLTAP09496 AC244394.1-201ENST00000435000 1665 ntBASIC16.02■□□□□ 0.16
CLTAP09496 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 AL354702.1-201ENST00000442006 1960 ntBASIC16.02■□□□□ 0.16
CLTAP09496 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.02■□□□□ 0.16
CLTAP09496 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
CLTAP09496 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLTAP09496 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CLTAP09496 AL590440.2-201ENST00000641973 1595 ntBASIC16.02■□□□□ 0.16
CLTAP09496 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLTAP09496 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.02■□□□□ 0.16
CLTAP09496 AC012441.2-201ENST00000444843 739 ntBASIC16.02■□□□□ 0.16
CLTAP09496 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.02■□□□□ 0.16
CLTAP09496 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.02■□□□□ 0.16
CLTAP09496 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.02■□□□□ 0.16
CLTAP09496 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.02■□□□□ 0.16
CLTAP09496 AC103988.2-201ENST00000561804 725 ntBASIC16.02■□□□□ 0.16
CLTAP09496 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.02■□□□□ 0.16
CLTAP09496 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.02■□□□□ 0.16
CLTAP09496 AC005324.6-201ENST00000587972 613 ntBASIC16.02■□□□□ 0.16
CLTAP09496 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.02■□□□□ 0.16
CLTAP09496 AC022748.3-201ENST00000621828 275 ntBASIC16.02■□□□□ 0.16
CLTAP09496 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLTAP09496 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLTAP09496 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLTAP09496 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLTAP09496 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLTAP09496 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLTAP09496 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CLTAP09496 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLTAP09496 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLTAP09496 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLTAP09496 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLTAP09496 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.02■□□□□ 0.15
CLTAP09496 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.02■□□□□ 0.15
CLTAP09496 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLTAP09496 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.01■□□□□ 0.15
CLTAP09496 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CLTAP09496 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLTAP09496 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.01■□□□□ 0.15
CLTAP09496 AC139712.1-201ENST00000378256 1875 ntBASIC16.01■□□□□ 0.15
CLTAP09496 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLTAP09496 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CLTAP09496 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLTAP09496 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLTAP09496 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLTAP09496 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLTAP09496 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLTAP09496 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CLTAP09496 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CLTAP09496 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLTAP09496 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLTAP09496 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CLTAP09496 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLTAP09496 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLTAP09496 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLTAP09496 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.01■□□□□ 0.15
CLTAP09496 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms