Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR3DP05423 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
POLR3DP05423 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
POLR3DP05423 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.47■□□□□ 0.39
POLR3DP05423 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
POLR3DP05423 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR3DP05423 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 AC144522.1-201ENST00000625111 1658 ntBASIC17.46■□□□□ 0.39
POLR3DP05423 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
POLR3DP05423 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR3DP05423 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR3DP05423 AC008132.1-202ENST00000342005 1389 ntBASIC17.46■□□□□ 0.39
POLR3DP05423 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
POLR3DP05423 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
POLR3DP05423 RN7SKP214-201ENST00000364208 315 ntBASIC17.46■□□□□ 0.39
POLR3DP05423 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.46■□□□□ 0.39
POLR3DP05423 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR3DP05423 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR3DP05423 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.46■□□□□ 0.39
POLR3DP05423 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR3DP05423 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.46■□□□□ 0.39
POLR3DP05423 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.46■□□□□ 0.39
POLR3DP05423 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
POLR3DP05423 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.46■□□□□ 0.39
POLR3DP05423 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
POLR3DP05423 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
POLR3DP05423 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.46■□□□□ 0.39
POLR3DP05423 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.46■□□□□ 0.39
POLR3DP05423 AP001267.2-201ENST00000532619 2086 ntBASIC17.46■□□□□ 0.39
POLR3DP05423 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
POLR3DP05423 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
POLR3DP05423 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
POLR3DP05423 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
POLR3DP05423 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR3DP05423 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR3DP05423 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
POLR3DP05423 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 AC006122.1-201ENST00000493323 440 ntBASIC17.45■□□□□ 0.38
POLR3DP05423 AC245884.6-201ENST00000515672 1067 ntBASIC17.45■□□□□ 0.38
POLR3DP05423 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.45■□□□□ 0.38
POLR3DP05423 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.45■□□□□ 0.38
POLR3DP05423 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR3DP05423 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR3DP05423 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR3DP05423 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.45■□□□□ 0.38
POLR3DP05423 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.45■□□□□ 0.38
POLR3DP05423 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR3DP05423 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR3DP05423 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
POLR3DP05423 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
POLR3DP05423 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR3DP05423 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
POLR3DP05423 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.45■□□□□ 0.38
POLR3DP05423 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.44■□□□□ 0.38
POLR3DP05423 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR3DP05423 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR3DP05423 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms