Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRAP01903 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRAP01903 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 RPL18P13-201ENST00000478088 569 ntBASIC15.68■□□□□ 0.1
HLA-DRAP01903 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 AC006122.1-201ENST00000493323 440 ntBASIC15.68■□□□□ 0.1
HLA-DRAP01903 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 AC104506.1-201ENST00000609247 429 ntBASIC15.68■□□□□ 0.1
HLA-DRAP01903 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.68■□□□□ 0.1
HLA-DRAP01903 AL023803.2-201ENST00000620080 638 ntBASIC15.68■□□□□ 0.1
HLA-DRAP01903 AC022748.3-201ENST00000621828 275 ntBASIC15.68■□□□□ 0.1
HLA-DRAP01903 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.68■□□□□ 0.1
HLA-DRAP01903 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRAP01903 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRAP01903 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 CICP16-201ENST00000502609 2813 ntBASIC15.68■□□□□ 0.1
HLA-DRAP01903 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRAP01903 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRAP01903 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRAP01903 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRAP01903 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HLA-DRAP01903 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HLA-DRAP01903 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 AC016397.2-201ENST00000624848 1985 ntBASIC15.67■□□□□ 0.1
HLA-DRAP01903 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 SCARNA21-201ENST00000517026 139 ntBASIC15.67■□□□□ 0.1
HLA-DRAP01903 FAM8A2P-201ENST00000528813 1142 ntBASIC15.67■□□□□ 0.1
HLA-DRAP01903 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 BNIP3P13-201ENST00000599968 566 ntBASIC15.67■□□□□ 0.1
HLA-DRAP01903 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 AC136759.1-202ENST00000530858 2194 ntBASIC15.67■□□□□ 0.1
HLA-DRAP01903 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DRAP01903 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DRAP01903 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRAP01903 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRAP01903 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DRAP01903 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRAP01903 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DRAP01903 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DRAP01903 AC004899.1-201ENST00000424687 1714 ntBASIC15.66■□□□□ 0.1
HLA-DRAP01903 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRAP01903 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRAP01903 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRAP01903 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DRAP01903 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DRAP01903 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DRAP01903 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DRAP01903 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms