Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC18.74■□□□□ 0.59
LTN1O94822 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 RPL13AP3-202ENST00000494676 1473 ntBASIC18.74■□□□□ 0.59
LTN1O94822 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.74■□□□□ 0.59
LTN1O94822 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
LTN1O94822 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
LTN1O94822 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
LTN1O94822 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
LTN1O94822 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.73■□□□□ 0.59
LTN1O94822 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 U3.5-201ENST00000363448 216 ntBASIC18.73■□□□□ 0.59
LTN1O94822 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
LTN1O94822 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LTN1O94822 ACTBP14-201ENST00000411655 1089 ntBASIC18.73■□□□□ 0.59
LTN1O94822 AC005722.1-201ENST00000431878 964 ntBASIC18.73■□□□□ 0.59
LTN1O94822 KRT18P15-201ENST00000458108 1291 ntBASIC18.73■□□□□ 0.59
LTN1O94822 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC18.73■□□□□ 0.59
LTN1O94822 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC18.73■□□□□ 0.59
LTN1O94822 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LTN1O94822 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC18.73■□□□□ 0.59
LTN1O94822 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.73■□□□□ 0.59
LTN1O94822 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
LTN1O94822 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC18.73■□□□□ 0.59
LTN1O94822 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC18.73■□□□□ 0.59
LTN1O94822 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC18.73■□□□□ 0.59
LTN1O94822 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC18.73■□□□□ 0.59
LTN1O94822 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC18.73■□□□□ 0.59
LTN1O94822 MT3-202ENST00000561640 514 ntTSL 3 BASIC18.73■□□□□ 0.59
LTN1O94822 AC126755.5-201ENST00000622756 267 ntBASIC18.73■□□□□ 0.59
LTN1O94822 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
LTN1O94822 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LTN1O94822 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC18.73■□□□□ 0.59
LTN1O94822 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC18.72■□□□□ 0.59
LTN1O94822 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LTN1O94822 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LTN1O94822 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LTN1O94822 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LTN1O94822 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
LTN1O94822 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LTN1O94822 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LTN1O94822 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LTN1O94822 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC18.72■□□□□ 0.59
LTN1O94822 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LTN1O94822 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LTN1O94822 GGTLC4P-201ENST00000402176 664 ntBASIC18.72■□□□□ 0.59
LTN1O94822 AP000244.1-201ENST00000424582 201 ntBASIC18.72■□□□□ 0.59
LTN1O94822 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC18.72■□□□□ 0.59
LTN1O94822 AL451000.1-201ENST00000451300 1186 ntBASIC18.72■□□□□ 0.59
LTN1O94822 GULOP-201ENST00000454030 748 ntBASIC18.72■□□□□ 0.59
LTN1O94822 AC100858.1-201ENST00000514059 1228 ntBASIC18.72■□□□□ 0.59
LTN1O94822 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC18.72■□□□□ 0.59
LTN1O94822 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC18.72■□□□□ 0.59
LTN1O94822 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LTN1O94822 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LTN1O94822 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.72■□□□□ 0.59
LTN1O94822 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LTN1O94822 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LTN1O94822 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC18.72■□□□□ 0.59
LTN1O94822 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
LTN1O94822 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.71■□□□□ 0.59
LTN1O94822 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LTN1O94822 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.71■□□□□ 0.59
LTN1O94822 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LTN1O94822 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
LTN1O94822 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LTN1O94822 RNA5SP491-201ENST00000362936 118 ntBASIC18.71■□□□□ 0.59
LTN1O94822 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC18.71■□□□□ 0.59
LTN1O94822 FAM21EP-201ENST00000417804 985 ntBASIC18.71■□□□□ 0.59
LTN1O94822 RN7SL288P-201ENST00000490496 291 ntBASIC18.71■□□□□ 0.59
LTN1O94822 COQ10BP2-201ENST00000513804 724 ntBASIC18.71■□□□□ 0.59
LTN1O94822 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC18.71■□□□□ 0.59
LTN1O94822 AP005212.2-201ENST00000584979 510 ntBASIC18.71■□□□□ 0.59
LTN1O94822 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC18.71■□□□□ 0.59
LTN1O94822 AC006548.2-201ENST00000605217 529 ntBASIC18.71■□□□□ 0.59
LTN1O94822 AC005274.1-201ENST00000623460 802 ntBASIC18.71■□□□□ 0.59
LTN1O94822 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LTN1O94822 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LTN1O94822 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LTN1O94822 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LTN1O94822 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LTN1O94822 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LTN1O94822 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LTN1O94822 AC092115.1-201ENST00000566277 1402 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms