Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 RPL30-202ENST00000396070 440 ntTSL 2 BASIC11.03□□□□□ -0.64
SNAI2O43623 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SNAI2O43623 AC004461.1-201ENST00000412461 403 ntBASIC11.03□□□□□ -0.64
SNAI2O43623 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.03□□□□□ -0.64
SNAI2O43623 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.03□□□□□ -0.64
SNAI2O43623 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SNAI2O43623 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.03□□□□□ -0.64
SNAI2O43623 MIR6080-201ENST00000617359 66 ntBASIC11.03□□□□□ -0.64
SNAI2O43623 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.03□□□□□ -0.64
SNAI2O43623 AC009093.7-201ENST00000623853 1223 ntBASIC11.03□□□□□ -0.64
SNAI2O43623 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SNAI2O43623 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.03□□□□□ -0.64
SNAI2O43623 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SNAI2O43623 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.03□□□□□ -0.64
SNAI2O43623 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.03□□□□□ -0.64
SNAI2O43623 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SNAI2O43623 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.03□□□□□ -0.64
SNAI2O43623 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
SNAI2O43623 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
SNAI2O43623 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.03□□□□□ -0.64
SNAI2O43623 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SNAI2O43623 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SNAI2O43623 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SNAI2O43623 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SNAI2O43623 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.02□□□□□ -0.64
SNAI2O43623 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.02□□□□□ -0.64
SNAI2O43623 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNAI2O43623 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNAI2O43623 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNAI2O43623 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNAI2O43623 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.02□□□□□ -0.64
SNAI2O43623 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNAI2O43623 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNAI2O43623 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.02□□□□□ -0.64
SNAI2O43623 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.02□□□□□ -0.64
SNAI2O43623 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SNAI2O43623 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.02□□□□□ -0.64
SNAI2O43623 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNAI2O43623 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SNAI2O43623 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
SNAI2O43623 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
SNAI2O43623 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
SNAI2O43623 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.02□□□□□ -0.64
SNAI2O43623 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SNAI2O43623 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 AC020658.7-201ENST00000624274 2442 ntBASIC11.02□□□□□ -0.65
SNAI2O43623 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SNAI2O43623 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SNAI2O43623 AL645937.2-201ENST00000396808 931 ntBASIC11.02□□□□□ -0.65
SNAI2O43623 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.02□□□□□ -0.65
SNAI2O43623 HLA-K-203ENST00000430151 1046 ntBASIC11.02□□□□□ -0.65
SNAI2O43623 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.02□□□□□ -0.65
SNAI2O43623 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.02□□□□□ -0.65
SNAI2O43623 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
SNAI2O43623 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.02□□□□□ -0.65
SNAI2O43623 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.02□□□□□ -0.65
SNAI2O43623 GAPDHP40-201ENST00000505218 1006 ntBASIC11.02□□□□□ -0.65
SNAI2O43623 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.02□□□□□ -0.65
SNAI2O43623 NME4-212ENST00000621774 904 ntTSL 3 BASIC11.02□□□□□ -0.65
SNAI2O43623 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.02□□□□□ -0.65
SNAI2O43623 AC004461.2-201ENST00000629517 803 ntBASIC11.02□□□□□ -0.65
SNAI2O43623 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.02□□□□□ -0.65
SNAI2O43623 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC11.02□□□□□ -0.65
SNAI2O43623 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SNAI2O43623 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.02□□□□□ -0.65
SNAI2O43623 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms