Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHL1O00533 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHL1O00533 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC18.54■□□□□ 0.56
CHL1O00533 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHL1O00533 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHL1O00533 TUBB8P4-201ENST00000511806 1324 ntBASIC18.53■□□□□ 0.56
CHL1O00533 KRT18P9-201ENST00000604826 1300 ntBASIC18.53■□□□□ 0.56
CHL1O00533 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHL1O00533 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHL1O00533 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHL1O00533 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHL1O00533 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.53■□□□□ 0.56
CHL1O00533 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CHL1O00533 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHL1O00533 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHL1O00533 AC152010.1-201ENST00000415779 2006 ntBASIC18.53■□□□□ 0.56
CHL1O00533 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.53■□□□□ 0.56
CHL1O00533 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CHL1O00533 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.53■□□□□ 0.56
CHL1O00533 EEF1DP6-201ENST00000449232 372 ntBASIC18.53■□□□□ 0.56
CHL1O00533 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CHL1O00533 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.53■□□□□ 0.56
CHL1O00533 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC18.53■□□□□ 0.56
CHL1O00533 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.53■□□□□ 0.56
CHL1O00533 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHL1O00533 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18.53■□□□□ 0.56
CHL1O00533 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.53■□□□□ 0.56
CHL1O00533 PRKXP1-201ENST00000561423 1122 ntBASIC18.53■□□□□ 0.56
CHL1O00533 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.53■□□□□ 0.56
CHL1O00533 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.53■□□□□ 0.56
CHL1O00533 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.53■□□□□ 0.56
CHL1O00533 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.53■□□□□ 0.56
CHL1O00533 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CHL1O00533 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.53■□□□□ 0.56
CHL1O00533 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHL1O00533 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHL1O00533 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.53■□□□□ 0.56
CHL1O00533 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CHL1O00533 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.52■□□□□ 0.56
CHL1O00533 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 AC067931.2-201ENST00000623655 2003 ntBASIC18.52■□□□□ 0.56
CHL1O00533 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC18.52■□□□□ 0.56
CHL1O00533 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.52■□□□□ 0.56
CHL1O00533 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC18.52■□□□□ 0.56
CHL1O00533 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.52■□□□□ 0.56
CHL1O00533 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 AL627231.1-201ENST00000394467 1125 ntBASIC18.52■□□□□ 0.56
CHL1O00533 AC103592.1-201ENST00000394513 664 ntBASIC18.52■□□□□ 0.56
CHL1O00533 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 RPL8P2-201ENST00000430538 502 ntBASIC18.52■□□□□ 0.56
CHL1O00533 AP000358.1-201ENST00000456260 156 ntBASIC18.52■□□□□ 0.56
CHL1O00533 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.52■□□□□ 0.56
CHL1O00533 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC18.52■□□□□ 0.56
CHL1O00533 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.52■□□□□ 0.56
CHL1O00533 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.52■□□□□ 0.56
CHL1O00533 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC18.52■□□□□ 0.56
CHL1O00533 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.52■□□□□ 0.56
CHL1O00533 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC18.52■□□□□ 0.56
CHL1O00533 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC18.52■□□□□ 0.56
CHL1O00533 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHL1O00533 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
CHL1O00533 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
CHL1O00533 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHL1O00533 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.52■□□□□ 0.55
CHL1O00533 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.52■□□□□ 0.55
CHL1O00533 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHL1O00533 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHL1O00533 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHL1O00533 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CHL1O00533 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHL1O00533 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC18.51■□□□□ 0.55
CHL1O00533 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.51■□□□□ 0.55
CHL1O00533 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHL1O00533 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CHL1O00533 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CHL1O00533 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.51■□□□□ 0.55
CHL1O00533 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHL1O00533 USP39-220ENST00000613444 2161 ntTSL 2 BASIC18.51■□□□□ 0.55
CHL1O00533 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC18.51■□□□□ 0.55
CHL1O00533 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHL1O00533 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHL1O00533 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CHL1O00533 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CHL1O00533 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHL1O00533 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC18.51■□□□□ 0.55
CHL1O00533 IGLV3-15-201ENST00000518356 244 ntBASIC18.51■□□□□ 0.55
CHL1O00533 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.51■□□□□ 0.55
CHL1O00533 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.51■□□□□ 0.55
CHL1O00533 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.51■□□□□ 0.55
CHL1O00533 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms