Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 BAATP1-201ENST00000412284 1225 ntBASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 AC012441.1-201ENST00000446669 685 ntBASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 AC011495.1-201ENST00000498085 584 ntBASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 AC092364.2-202ENST00000597012 1073 ntBASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 AC010319.3-201ENST00000597028 470 ntBASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.15□□□□□ -0.3
POLR1DQ9Y2S0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.15□□□□□ -0.31
POLR1DQ9Y2S0 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
POLR1DQ9Y2S0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
POLR1DQ9Y2S0 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 AC027601.5-201ENST00000624065 2482 ntBASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 RN7SL752P-201ENST00000463779 287 ntBASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 MIR5189-201ENST00000577370 114 ntBASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 AC145423.3-201ENST00000615987 467 ntBASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
POLR1DQ9Y2S0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms