Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 PHBP15-201ENST00000574228 665 ntBASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 AC104506.1-201ENST00000609247 429 ntBASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 AC006453.1-201ENST00000636037 1257 ntBASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.88□□□□□ -0.35
KIAA1549Q9HCM3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 KRT18P9-201ENST00000604826 1300 ntBASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 DUTP3-201ENST00000450025 415 ntBASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
KIAA1549Q9HCM3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
KIAA1549Q9HCM3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms