Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CDKL2Q92772 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CDKL2Q92772 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL2Q92772 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.84□□□□□ -0.03
CDKL2Q92772 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL2Q92772 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL2Q92772 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.83□□□□□ -0.03
CDKL2Q92772 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL2Q92772 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL2Q92772 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL2Q92772 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL2Q92772 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL2Q92772 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL2Q92772 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
CDKL2Q92772 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL2Q92772 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CDKL2Q92772 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CDKL2Q92772 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL2Q92772 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKL2Q92772 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDKL2Q92772 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDKL2Q92772 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDKL2Q92772 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKL2Q92772 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CDKL2Q92772 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKL2Q92772 AC098850.1-201ENST00000419919 790 ntBASIC14.83□□□□□ -0.04
CDKL2Q92772 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKL2Q92772 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKL2Q92772 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDKL2Q92772 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.83□□□□□ -0.04
CDKL2Q92772 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKL2Q92772 SORD2P-201ENST00000558556 1069 ntBASIC14.83□□□□□ -0.04
CDKL2Q92772 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKL2Q92772 CLUHP6-201ENST00000580789 941 ntBASIC14.83□□□□□ -0.04
CDKL2Q92772 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
CDKL2Q92772 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKL2Q92772 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKL2Q92772 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CDKL2Q92772 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDKL2Q92772 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDKL2Q92772 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDKL2Q92772 KHSRPP1-201ENST00000427983 1768 ntBASIC14.83□□□□□ -0.04
CDKL2Q92772 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL2Q92772 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDKL2Q92772 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CDKL2Q92772 AC089987.1-201ENST00000551654 2209 ntBASIC14.82□□□□□ -0.04
CDKL2Q92772 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDKL2Q92772 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDKL2Q92772 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDKL2Q92772 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 CICP16-201ENST00000502609 2813 ntBASIC14.82□□□□□ -0.04
CDKL2Q92772 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKL2Q92772 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 MESTP3-201ENST00000503460 968 ntBASIC14.82□□□□□ -0.04
CDKL2Q92772 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.82□□□□□ -0.04
CDKL2Q92772 RFPL4AP1-201ENST00000530883 850 ntBASIC14.82□□□□□ -0.04
CDKL2Q92772 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKL2Q92772 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKL2Q92772 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKL2Q92772 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKL2Q92772 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKL2Q92772 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKL2Q92772 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKL2Q92772 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL2Q92772 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms