Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.54■□□□□ 0.08
SHC3Q92529 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 RBM8B-201ENST00000555532 525 ntBASIC15.54■□□□□ 0.08
SHC3Q92529 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SHC3Q92529 AC133552.6-201ENST00000613406 534 ntBASIC15.54■□□□□ 0.08
SHC3Q92529 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
SHC3Q92529 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.54■□□□□ 0.08
SHC3Q92529 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.54■□□□□ 0.08
SHC3Q92529 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.54■□□□□ 0.08
SHC3Q92529 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SHC3Q92529 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SHC3Q92529 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.54■□□□□ 0.08
SHC3Q92529 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.54■□□□□ 0.08
SHC3Q92529 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.54■□□□□ 0.08
SHC3Q92529 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SHC3Q92529 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SHC3Q92529 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SHC3Q92529 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.54■□□□□ 0.08
SHC3Q92529 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.53■□□□□ 0.08
SHC3Q92529 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SHC3Q92529 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 OR2I1P-209ENST00000641730 5365 ntBASIC15.53■□□□□ 0.08
SHC3Q92529 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.53■□□□□ 0.08
SHC3Q92529 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.53■□□□□ 0.08
SHC3Q92529 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SHC3Q92529 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.53■□□□□ 0.08
SHC3Q92529 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.53■□□□□ 0.08
SHC3Q92529 AC012441.2-201ENST00000444843 739 ntBASIC15.53■□□□□ 0.08
SHC3Q92529 HSPB1P2-201ENST00000448722 546 ntBASIC15.53■□□□□ 0.08
SHC3Q92529 KRT223P-202ENST00000449164 1292 ntBASIC15.53■□□□□ 0.08
SHC3Q92529 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.53■□□□□ 0.08
SHC3Q92529 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.53■□□□□ 0.08
SHC3Q92529 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.53■□□□□ 0.08
SHC3Q92529 AC100827.2-201ENST00000563214 1194 ntBASIC15.53■□□□□ 0.08
SHC3Q92529 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.53■□□□□ 0.08
SHC3Q92529 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SHC3Q92529 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.53■□□□□ 0.08
SHC3Q92529 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SHC3Q92529 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SHC3Q92529 AC015818.8-201ENST00000587907 1519 ntBASIC15.53■□□□□ 0.08
SHC3Q92529 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.53■□□□□ 0.08
SHC3Q92529 AL157996.1-201ENST00000624684 2299 ntBASIC15.52■□□□□ 0.08
SHC3Q92529 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SHC3Q92529 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.52■□□□□ 0.08
SHC3Q92529 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.52■□□□□ 0.08
SHC3Q92529 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SHC3Q92529 USP17L6P-201ENST00000382470 1197 ntBASIC15.52■□□□□ 0.08
SHC3Q92529 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.52■□□□□ 0.08
SHC3Q92529 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.52■□□□□ 0.08
SHC3Q92529 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.52■□□□□ 0.08
SHC3Q92529 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.52■□□□□ 0.08
SHC3Q92529 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.52■□□□□ 0.08
SHC3Q92529 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.52■□□□□ 0.08
SHC3Q92529 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.52■□□□□ 0.08
SHC3Q92529 AC009884.2-201ENST00000603110 324 ntBASIC15.52■□□□□ 0.08
SHC3Q92529 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.52■□□□□ 0.08
SHC3Q92529 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SHC3Q92529 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms