Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.54■□□□□ 0.08
DDX1Q92499 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.54■□□□□ 0.08
DDX1Q92499 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.54■□□□□ 0.08
DDX1Q92499 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
DDX1Q92499 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
DDX1Q92499 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.54■□□□□ 0.08
DDX1Q92499 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.54■□□□□ 0.08
DDX1Q92499 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.54■□□□□ 0.08
DDX1Q92499 AL645933.1-201ENST00000440087 609 ntBASIC15.54■□□□□ 0.08
DDX1Q92499 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.54■□□□□ 0.08
DDX1Q92499 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.54■□□□□ 0.08
DDX1Q92499 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.54■□□□□ 0.08
DDX1Q92499 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.54■□□□□ 0.08
DDX1Q92499 ACTG1P17-201ENST00000558391 1119 ntBASIC15.54■□□□□ 0.08
DDX1Q92499 DUX4L46-201ENST00000566845 751 ntBASIC15.54■□□□□ 0.08
DDX1Q92499 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.54■□□□□ 0.08
DDX1Q92499 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.54■□□□□ 0.08
DDX1Q92499 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.54■□□□□ 0.08
DDX1Q92499 MIR7845-201ENST00000618396 99 ntBASIC15.54■□□□□ 0.08
DDX1Q92499 AC128714.1-201ENST00000637035 887 ntBASIC15.54■□□□□ 0.08
DDX1Q92499 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.54■□□□□ 0.08
DDX1Q92499 AC090643.2-201ENST00000623442 2029 ntBASIC15.54■□□□□ 0.08
DDX1Q92499 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
DDX1Q92499 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.54■□□□□ 0.08
DDX1Q92499 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.54■□□□□ 0.08
DDX1Q92499 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.54■□□□□ 0.08
DDX1Q92499 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.54■□□□□ 0.08
DDX1Q92499 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
DDX1Q92499 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 KRT8P19-201ENST00000551916 1455 ntBASIC15.53■□□□□ 0.08
DDX1Q92499 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.53■□□□□ 0.08
DDX1Q92499 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.53■□□□□ 0.08
DDX1Q92499 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.53■□□□□ 0.08
DDX1Q92499 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
DDX1Q92499 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 BEND3P1-201ENST00000421591 1944 ntBASIC15.53■□□□□ 0.08
DDX1Q92499 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.53■□□□□ 0.08
DDX1Q92499 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
DDX1Q92499 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.53■□□□□ 0.08
DDX1Q92499 AL157407.1-201ENST00000435784 904 ntBASIC15.53■□□□□ 0.08
DDX1Q92499 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 BX284668.4-201ENST00000453917 508 ntBASIC15.53■□□□□ 0.08
DDX1Q92499 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
DDX1Q92499 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.53■□□□□ 0.08
DDX1Q92499 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 AC005586.2-201ENST00000563946 837 ntBASIC15.53■□□□□ 0.08
DDX1Q92499 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 SPCS2P2-201ENST00000603270 608 ntBASIC15.53■□□□□ 0.08
DDX1Q92499 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.53■□□□□ 0.08
DDX1Q92499 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.53■□□□□ 0.08
DDX1Q92499 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
DDX1Q92499 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
DDX1Q92499 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
DDX1Q92499 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
DDX1Q92499 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 AL022313.4-201ENST00000562756 2046 ntBASIC15.53■□□□□ 0.08
DDX1Q92499 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
DDX1Q92499 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.53■□□□□ 0.08
DDX1Q92499 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms