Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 TMCO5B-205ENST00000530020 894 ntBASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 AC093752.3-201ENST00000567343 901 ntBASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 AC008825.2-201ENST00000603374 718 ntBASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 LINC00431-202ENST00000636375 159 ntBASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 CICP23-201ENST00000605013 2741 ntBASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2AF1L4Q8WU68 AC020910.5-201ENST00000623668 1865 ntBASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 BAK1P1-201ENST00000317045 636 ntBASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 MIR5196-201ENST00000578146 115 ntBASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 SIGLEC18P-201ENST00000602271 909 ntBASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 AC005618.3-201ENST00000624928 458 ntBASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 CICP11-201ENST00000434745 2827 ntBASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
U2AF1L4Q8WU68 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
U2AF1L4Q8WU68 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
U2AF1L4Q8WU68 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
U2AF1L4Q8WU68 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 AC011840.2-201ENST00000563063 1520 ntBASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 AC015909.3-201ENST00000572855 1794 ntBASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 AC090502.4-201ENST00000551714 1386 ntBASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 MIR557-201ENST00000385239 98 ntBASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 PSMD4P1-201ENST00000433951 1109 ntBASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 AC026410.1-201ENST00000507366 1101 ntBASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.7■□□□□ 0.26
U2AF1L4Q8WU68 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms