Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTR9Q6PD62 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTR9Q6PD62 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTR9Q6PD62 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTR9Q6PD62 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 MIR769-201ENST00000390225 118 ntBASIC17.34■□□□□ 0.37
CTR9Q6PD62 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTR9Q6PD62 AC215219.1-201ENST00000400706 1817 ntBASIC17.34■□□□□ 0.37
CTR9Q6PD62 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTR9Q6PD62 XBP1P1-201ENST00000436573 652 ntBASIC17.34■□□□□ 0.37
CTR9Q6PD62 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTR9Q6PD62 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTR9Q6PD62 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTR9Q6PD62 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 AL157791.1-201ENST00000553667 1699 ntBASIC17.34■□□□□ 0.37
CTR9Q6PD62 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.34■□□□□ 0.37
CTR9Q6PD62 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.34■□□□□ 0.37
CTR9Q6PD62 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTR9Q6PD62 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 AC092299.1-201ENST00000632679 757 ntBASIC17.34■□□□□ 0.37
CTR9Q6PD62 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTR9Q6PD62 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTR9Q6PD62 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.34■□□□□ 0.37
CTR9Q6PD62 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTR9Q6PD62 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
CTR9Q6PD62 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTR9Q6PD62 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.33■□□□□ 0.37
CTR9Q6PD62 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTR9Q6PD62 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTR9Q6PD62 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTR9Q6PD62 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
CTR9Q6PD62 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTR9Q6PD62 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTR9Q6PD62 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTR9Q6PD62 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTR9Q6PD62 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTR9Q6PD62 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTR9Q6PD62 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTR9Q6PD62 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTR9Q6PD62 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 ST13P19-201ENST00000442505 1124 ntBASIC17.33■□□□□ 0.36
CTR9Q6PD62 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 RN7SL11P-201ENST00000471305 293 ntBASIC17.33■□□□□ 0.36
CTR9Q6PD62 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTR9Q6PD62 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 CHMP4BP1-201ENST00000556017 588 ntBASIC17.33■□□□□ 0.36
CTR9Q6PD62 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 AL157813.1-201ENST00000612996 587 ntBASIC17.33■□□□□ 0.36
CTR9Q6PD62 AP001505.2-201ENST00000616815 443 ntBASIC17.33■□□□□ 0.36
CTR9Q6PD62 AC138627.1-207ENST00000641560 1006 ntBASIC17.33■□□□□ 0.36
CTR9Q6PD62 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTR9Q6PD62 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTR9Q6PD62 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTR9Q6PD62 AC113367.3-201ENST00000508316 1912 ntBASIC17.33■□□□□ 0.36
CTR9Q6PD62 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTR9Q6PD62 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.33■□□□□ 0.36
CTR9Q6PD62 AC018629.1-201ENST00000623381 1736 ntBASIC17.33■□□□□ 0.36
CTR9Q6PD62 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CTR9Q6PD62 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTR9Q6PD62 AC026748.1-201ENST00000624349 3251 ntBASIC17.32■□□□□ 0.36
CTR9Q6PD62 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTR9Q6PD62 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTR9Q6PD62 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTR9Q6PD62 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.32■□□□□ 0.36
CTR9Q6PD62 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CTR9Q6PD62 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTR9Q6PD62 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTR9Q6PD62 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.32■□□□□ 0.36
CTR9Q6PD62 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
CTR9Q6PD62 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CTR9Q6PD62 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTR9Q6PD62 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CTR9Q6PD62 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.32■□□□□ 0.36
CTR9Q6PD62 OR2I1P-210ENST00000642037 4691 ntBASIC17.32■□□□□ 0.36
CTR9Q6PD62 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTR9Q6PD62 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTR9Q6PD62 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTR9Q6PD62 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTR9Q6PD62 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.32■□□□□ 0.36
CTR9Q6PD62 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms