Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 GPAA1P2-201ENST00000417923 928 ntBASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 RNMTL1P1-201ENST00000454103 560 ntBASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 AC022494.1-201ENST00000466044 728 ntBASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 DUX4L46-201ENST00000566845 751 ntBASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 AC009955.4-201ENST00000597192 544 ntBASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 BX088702.1-201ENST00000610784 235 ntBASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
RFWD3Q6PCD5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 PTENP1-202ENST00000532280 3996 ntBASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 AC021723.1-201ENST00000486306 515 ntBASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 AP001258.2-201ENST00000529891 490 ntBASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 AC100827.2-201ENST00000563214 1194 ntBASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 CICP8-201ENST00000455800 2813 ntBASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 AL359183.1-201ENST00000623796 2132 ntBASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RFWD3Q6PCD5 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RFWD3Q6PCD5 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms