Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AL022342.1-201ENST00000400363 863 ntBASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AL353705.2-201ENST00000428243 662 ntBASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 KRT18P3-201ENST00000451602 1288 ntBASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 RN7SL589P-201ENST00000481268 310 ntBASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AL133215.2-201ENST00000609242 977 ntBASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ERCC6LQ2NKX8 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 TOMM22P5-201ENST00000416399 439 ntBASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 IGHV3-62-201ENST00000520057 340 ntBASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 AL021155.1-201ENST00000438808 2637 ntBASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 AC004623.1-201ENST00000624592 2127 ntBASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 AC115284.2-201ENST00000624646 2054 ntBASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC15.53■□□□□ 0.08
ERCC6LQ2NKX8 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 TNRC18P1-201ENST00000502875 3650 ntBASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 PER1-202ENST00000354903 3115 ntTSL 2 BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 FAM86C2P-203ENST00000528684 1004 ntBASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
ERCC6LQ2NKX8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms