Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGCS1Q01581 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HMGCS1Q01581 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCS1Q01581 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCS1Q01581 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCS1Q01581 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCS1Q01581 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGCS1Q01581 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCS1Q01581 TCAM1P-207ENST00000485295 1537 ntBASIC14.14□□□□□ -0.15
HMGCS1Q01581 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.14□□□□□ -0.15
HMGCS1Q01581 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGCS1Q01581 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCS1Q01581 CU639417.3-201ENST00000624240 1404 ntBASIC14.14□□□□□ -0.15
HMGCS1Q01581 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
HMGCS1Q01581 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
HMGCS1Q01581 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCS1Q01581 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCS1Q01581 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMGCS1Q01581 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCS1Q01581 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCS1Q01581 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 COX5BP8-201ENST00000416911 349 ntBASIC14.13□□□□□ -0.15
HMGCS1Q01581 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 NME2P1-201ENST00000426182 414 ntBASIC14.13□□□□□ -0.15
HMGCS1Q01581 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 BCRP2-202ENST00000447763 634 ntBASIC14.13□□□□□ -0.15
HMGCS1Q01581 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 AC011495.1-201ENST00000498085 584 ntBASIC14.13□□□□□ -0.15
HMGCS1Q01581 BCRP6-201ENST00000510112 632 ntBASIC14.13□□□□□ -0.15
HMGCS1Q01581 BCRP7-201ENST00000511549 544 ntBASIC14.13□□□□□ -0.15
HMGCS1Q01581 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 AP003171.2-201ENST00000528208 925 ntBASIC14.13□□□□□ -0.15
HMGCS1Q01581 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 AC012645.4-201ENST00000610691 1061 ntBASIC14.13□□□□□ -0.15
HMGCS1Q01581 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HMGCS1Q01581 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 AC079781.5-202ENST00000641784 3743 ntBASIC14.13□□□□□ -0.15
HMGCS1Q01581 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCS1Q01581 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.12□□□□□ -0.15
HMGCS1Q01581 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCS1Q01581 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 ALG3P1-201ENST00000508806 1114 ntBASIC14.12□□□□□ -0.15
HMGCS1Q01581 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.12□□□□□ -0.15
HMGCS1Q01581 OR10B1P-201ENST00000601666 907 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms