Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AL136301.1-201ENST00000615830 422 ntBASIC12.8□□□□□ -0.36
HIST1H3AP68431 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 AC008687.7-202ENST00000637404 953 ntBASIC12.8□□□□□ -0.36
HIST1H3AP68431 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 KRT8P24-201ENST00000560290 1559 ntBASIC12.8□□□□□ -0.36
HIST1H3AP68431 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H3AP68431 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H3AP68431 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 AL359881.3-201ENST00000602640 1721 ntBASIC12.79□□□□□ -0.36
HIST1H3AP68431 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 AC079776.1-201ENST00000401540 1152 ntBASIC12.79□□□□□ -0.36
HIST1H3AP68431 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 AC112492.5-201ENST00000421897 457 ntBASIC12.79□□□□□ -0.36
HIST1H3AP68431 AC026954.1-201ENST00000429771 1293 ntBASIC12.79□□□□□ -0.36
HIST1H3AP68431 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 HIST2H2BB-201ENST00000449108 381 ntBASIC12.79□□□□□ -0.36
HIST1H3AP68431 HOMER2P2-201ENST00000451621 847 ntBASIC12.79□□□□□ -0.36
HIST1H3AP68431 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 BEND3P1-201ENST00000421591 1944 ntBASIC12.79□□□□□ -0.36
HIST1H3AP68431 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H3AP68431 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H3AP68431 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.78□□□□□ -0.36
HIST1H3AP68431 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HIST1H3AP68431 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms