Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.25□□□□□ -0.13
YBX1P67809 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 AL359881.3-201ENST00000602640 1721 ntBASIC14.25□□□□□ -0.13
YBX1P67809 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
YBX1P67809 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 MIR1908-201ENST00000410394 80 ntBASIC14.25□□□□□ -0.13
YBX1P67809 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.25□□□□□ -0.13
YBX1P67809 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
YBX1P67809 AL355994.2-201ENST00000447882 704 ntBASIC14.25□□□□□ -0.13
YBX1P67809 FAM86HP-204ENST00000513466 959 ntBASIC14.25□□□□□ -0.13
YBX1P67809 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.25□□□□□ -0.13
YBX1P67809 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.25□□□□□ -0.13
YBX1P67809 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
YBX1P67809 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.25□□□□□ -0.13
YBX1P67809 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.25□□□□□ -0.13
YBX1P67809 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 AC015688.4-201ENST00000580780 1647 ntBASIC14.25□□□□□ -0.13
YBX1P67809 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
YBX1P67809 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.25□□□□□ -0.13
YBX1P67809 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
YBX1P67809 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.24□□□□□ -0.13
YBX1P67809 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.24□□□□□ -0.13
YBX1P67809 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
YBX1P67809 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
YBX1P67809 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.24□□□□□ -0.13
YBX1P67809 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.24□□□□□ -0.13
YBX1P67809 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.24□□□□□ -0.13
YBX1P67809 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.24□□□□□ -0.13
YBX1P67809 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
YBX1P67809 PUDPP3-201ENST00000445368 636 ntBASIC14.24□□□□□ -0.13
YBX1P67809 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.24□□□□□ -0.13
YBX1P67809 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.24□□□□□ -0.13
YBX1P67809 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.24□□□□□ -0.13
YBX1P67809 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
YBX1P67809 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.24□□□□□ -0.13
YBX1P67809 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.24□□□□□ -0.13
YBX1P67809 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.24□□□□□ -0.13
YBX1P67809 AL096828.3-201ENST00000615354 462 ntBASIC14.24□□□□□ -0.13
YBX1P67809 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.24□□□□□ -0.13
YBX1P67809 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.24□□□□□ -0.13
YBX1P67809 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
YBX1P67809 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
YBX1P67809 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
YBX1P67809 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
YBX1P67809 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
YBX1P67809 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.24□□□□□ -0.13
YBX1P67809 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
YBX1P67809 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
YBX1P67809 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
YBX1P67809 PKD1P5-201ENST00000532415 10291 ntBASIC14.23□□□□□ -0.13
YBX1P67809 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.23□□□□□ -0.13
YBX1P67809 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
YBX1P67809 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.23□□□□□ -0.13
YBX1P67809 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
YBX1P67809 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms