Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN8P56748 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CLDN8P56748 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CLDN8P56748 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDN8P56748 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN8P56748 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN8P56748 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN8P56748 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDN8P56748 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDN8P56748 GNRHR2-203ENST00000581100 1187 ntBASIC13.92□□□□□ -0.18
CLDN8P56748 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CLDN8P56748 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.92□□□□□ -0.18
CLDN8P56748 AC002472.3-201ENST00000640124 621 ntBASIC13.92□□□□□ -0.18
CLDN8P56748 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.92□□□□□ -0.18
CLDN8P56748 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN8P56748 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLDN8P56748 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.92□□□□□ -0.18
CLDN8P56748 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLDN8P56748 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN8P56748 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.92□□□□□ -0.18
CLDN8P56748 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLDN8P56748 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CLDN8P56748 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN8P56748 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 AGAP10P-201ENST00000454844 2418 ntBASIC13.91□□□□□ -0.18
CLDN8P56748 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN8P56748 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDN8P56748 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN8P56748 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDN8P56748 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLDN8P56748 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CLDN8P56748 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLDN8P56748 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN8P56748 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
CLDN8P56748 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.91□□□□□ -0.18
CLDN8P56748 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.91□□□□□ -0.18
CLDN8P56748 AL355864.2-201ENST00000447420 863 ntBASIC13.91□□□□□ -0.18
CLDN8P56748 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDN8P56748 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 RNA5SP486-201ENST00000515961 83 ntBASIC13.91□□□□□ -0.18
CLDN8P56748 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN8P56748 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.91□□□□□ -0.18
CLDN8P56748 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLDN8P56748 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.91□□□□□ -0.18
CLDN8P56748 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.91□□□□□ -0.18
CLDN8P56748 ECM1P1-201ENST00000604092 1279 ntBASIC13.91□□□□□ -0.18
CLDN8P56748 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLDN8P56748 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDN8P56748 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 AL022313.4-201ENST00000562756 2046 ntBASIC13.91□□□□□ -0.18
CLDN8P56748 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
CLDN8P56748 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CLDN8P56748 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CLDN8P56748 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN8P56748 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN8P56748 AC005252.3-201ENST00000623855 2258 ntBASIC13.9□□□□□ -0.18
CLDN8P56748 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms